RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 SCARB1Q8WTV0 552 aa13.23□□□□□ -0.29
COL1A2-202ENST00000461525 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
COL1A2-202ENST00000461525 TMEM14BQ9NUH8 114 aa13.23□□□□□ -0.29
COL1A2-202ENST00000461525 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
COL1A2-202ENST00000461525 DBX1A6NMT0 343 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 K7EIM0 57 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 NDUFA4O00483 81 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 HPGDSO60760 199 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 ELK1P19419 428 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 Q56UQ5 140 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 CHRDL1Q9BU40 450 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
COL1A2-202ENST00000461525 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
COL1A2-202ENST00000461525 RORCP51449 518 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 UCP3P55916 312 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 LAMTOR1Q6IAA8 161 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 OR2C3Q8N628 320 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 SEC22AQ96IW7 307 aa13.21□□□□□ -0.29
COL1A2-202ENST00000461525 SACSQ9NZJ4 4579 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 M0QYG6 137 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 TSPAN4O14817 238 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 ADMP35318 185 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 OR4A16Q8NH70 328 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 MRGPRFQ96AM1 343 aa13.2□□□□□ -0.3
COL1A2-202ENST00000461525 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 JTBO76095 146 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 IGKV1-39P01597 117 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 IGKV1D-39P04432 117 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 RNASE12Q5GAN4 147 aaKnown RBP13.19□□□□□ -0.3
COL1A2-202ENST00000461525 AP3S1Q92572 193 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 MISP3Q96FF7 219 aa13.19□□□□□ -0.3
COL1A2-202ENST00000461525 K7EMT4 169 aa13.18□□□□□ -0.3
COL1A2-202ENST00000461525 NUPL2O15504 423 aaKnown RBP13.18□□□□□ -0.3
COL1A2-202ENST00000461525 ZNF207O43670 478 aaKnown RBP13.18□□□□□ -0.3
COL1A2-202ENST00000461525 PGAM2P15259 253 aa13.18□□□□□ -0.3
COL1A2-202ENST00000461525 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
COL1A2-202ENST00000461525 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
COL1A2-202ENST00000461525 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
COL1A2-202ENST00000461525 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
COL1A2-202ENST00000461525 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
COL1A2-202ENST00000461525 OR4C46A6NHA9 309 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 C15orf62A8K5M9 175 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 GABARAPO95166 117 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 CTSGP08311 255 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 APOC4P55056 127 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 MFAP4P55083 255 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 HSPE1P61604 102 aaKnown RBP13.17□□□□□ -0.3
COL1A2-202ENST00000461525 KLK11Q9UBX7 282 aa13.17□□□□□ -0.3
COL1A2-202ENST00000461525 I3L2K1 104 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 YIF1AO95070 293 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
COL1A2-202ENST00000461525 RND3P61587 244 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 ODF3L2Q3SX64 289 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 ARRDC1Q8N5I2 433 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 ZNF114Q8NC26 417 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 ZNF486Q96H40 463 aaPredicted RBP13.16□□□□□ -0.3
COL1A2-202ENST00000461525 TXN2Q99757 166 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
COL1A2-202ENST00000461525 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
COL1A2-202ENST00000461525 MT-CO2P00403 227 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 CD3DP04234 171 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-202ENST00000461525 ZNF182P17025 639 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-202ENST00000461525 PI3P19957 117 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 TBPP20226 339 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 AKR1C2P52895 323 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 PIGPP57054 158 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
COL1A2-202ENST00000461525 CTF1Q16619 201 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 OR52I2Q8NH67 350 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
COL1A2-202ENST00000461525 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
COL1A2-202ENST00000461525 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 GNG7O60262 68 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 SPINK9Q5DT21 86 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 Q6ZWC4 215 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 MTFP1Q9UDX5 166 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 TP53TG1Q9Y2A0 90 aa13.14□□□□□ -0.31
COL1A2-202ENST00000461525 UBE2CO00762 179 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 ATG12O94817 140 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 IGKV1-5P01602 117 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 PPP5CP53041 499 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 GPR107Q5VW38 600 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 SLC35G3Q8N808 338 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 C15orf40Q8WUR7 153 aa13.13□□□□□ -0.31
COL1A2-202ENST00000461525 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms