RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TSSC4Q9Y5U2 329 aaPredicted RBP8.76□□□□□ -1.01
SSBP1-202ENST00000461433 C7orf66A4D0T2 115 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 CDX1P47902 265 aaPredicted RBP8.75□□□□□ -1.01
SSBP1-202ENST00000461433 DEFA5Q01523 94 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 TNFRSF9Q07011 255 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 TATDN3Q17R31 274 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 C11orf87Q6NUJ2 197 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 UXS1Q8NBZ7 420 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 UBE2E2Q96LR5 201 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 PLEKHA3Q9HB20 300 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 ZNF355PQ9NSJ1 428 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 IGLV11-55A0A075B6I3 123 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 A0A1W2PRX2 142 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 CCSO14618 274 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 IFNA21P01568 189 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 TRGV3P03979 118 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 TPPP2P59282 170 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 NSUN5P1Q3KNT7 163 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 ZNF114Q8NC26 417 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 OR4D5Q8NGN0 318 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 OR1S1Q8NH92 325 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 P2RX4Q99571 388 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 PDCD10Q9BUL8 212 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
SSBP1-202ENST00000461433 F11RQ9Y624 299 aaKnown RBP8.75□□□□□ -1.01
SSBP1-202ENST00000461433 DNHD1Q96M86 4753 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 RHOGP84095 191 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 ID3Q02535 119 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 KHDC1LQ5JSQ8 128 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 RBKSQ9H477 322 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 CACFD1Q9UGQ2 172 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 ALG5Q9Y673 324 aa8.74□□□□□ -1.01
SSBP1-202ENST00000461433 FAM90A26D6RGX4 464 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 I3L521 148 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 OR2J3O76001 311 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 NDUFB8O95169 186 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 DEFA4P12838 97 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 HOXA1P49639 335 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-202ENST00000461433 ERHP84090 104 aaKnown RBP8.73□□□□□ -1.01
SSBP1-202ENST00000461433 IAH1Q2TAA2 248 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-202ENST00000461433 PVRIGQ6DKI7 326 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 ZBTB8BQ8NAP8 495 aaPredicted RBP8.73□□□□□ -1.01
SSBP1-202ENST00000461433 NECAP1Q8NC96 275 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
SSBP1-202ENST00000461433 C13orf42A0A1B0GVH6 325 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 FAM223BA6NKX1 122 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 IGHV3-11P01762 117 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 RNASE2P10153 161 aaKnown RBP8.72□□□□□ -1.01
SSBP1-202ENST00000461433 HIST1H1BP16401 226 aaKnown RBP8.72□□□□□ -1.01
SSBP1-202ENST00000461433 RUNX1Q01196 453 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 IL15RAQ13261 267 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 FAM223AQ8IWN6 122 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 KLHL30-AS1Q8NEE0 82 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 TMEM170AQ8WVE7 144 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 USMG5Q96IX5 58 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 A0A0G2JLM5 398 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 TSPAN15O95858 294 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 DEFB136Q30KP8 78 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 SLC25A24Q6NUK1 477 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 ZNF343Q6P1L6 599 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 ETV3LQ6ZN32 361 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 MRPL41Q8IXM3 137 aaKnown RBP8.72□□□□□ -1.01
SSBP1-202ENST00000461433 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 RAX2Q96IS3 184 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 C2orf50Q96LR7 162 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 OR5B12Q96R08 314 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 ENY2Q9NPA8 101 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 HEYLQ9NQ87 328 aaPredicted RBP8.72□□□□□ -1.01
SSBP1-202ENST00000461433 GSKIPQ9P0R6 139 aa8.72□□□□□ -1.01
SSBP1-202ENST00000461433 VWFP04275 2813 aa8.71□□□□□ -1.01
SSBP1-202ENST00000461433 TRRAPQ9Y4A5 3859 aa8.71□□□□□ -1.01
SSBP1-202ENST00000461433 C5orf51A6NDU8 294 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 MFSD2BA6NFX1 497 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 FAM25EA8MYX2 175 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 SYNGR2O43760 224 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 SIX6O95475 246 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.02
SSBP1-202ENST00000461433 SNCAP37840 140 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 NKX2-1P43699 371 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-202ENST00000461433 POLR2GP62487 172 aaKnown RBP eCLIP8.71□□□□□ -1.02
SSBP1-202ENST00000461433 ATP5G2Q06055 141 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 GSG1LQ6UXU4 331 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 OR1L6Q8NGR2 347 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 WDR89Q96FK6 387 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-202ENST00000461433 DUX3Q96PT4 197 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 S4R3C0 116 aa8.71□□□□□ -1.02
SSBP1-202ENST00000461433 NUDT19A8MXV4 375 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 I3L2K1 104 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 K7EIM0 57 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 M0QZ24 198 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 GOSR2O14653 212 aa8.7□□□□□ -1.02
SSBP1-202ENST00000461433 SSNA1O43805 119 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms