RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 MCRIP2Q9BUT9 160 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-210ENST00000460909 PEF1Q9UBV8 284 aaKnown RBP15.85■□□□□ 0.13
RPUSD3-210ENST00000460909 ST8SIA3O43173 380 aa15.84■□□□□ 0.13
RPUSD3-210ENST00000460909 MFAP2P55001 183 aa15.84■□□□□ 0.13
RPUSD3-210ENST00000460909 CENPSQ8N2Z9 138 aa15.84■□□□□ 0.13
RPUSD3-210ENST00000460909 SLC35G3Q8N808 338 aa15.84■□□□□ 0.13
RPUSD3-210ENST00000460909 F11RQ9Y624 299 aaKnown RBP15.84■□□□□ 0.13
RPUSD3-210ENST00000460909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 WIPF1O43516 503 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 ANXA3P12429 323 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 HOXD3P31249 432 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 DEFA6Q01524 100 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 LYZL2Q7Z4W2 148 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 OR2C3Q8N628 320 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 RNASE11Q8TAA1 199 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 FLVCR2Q9UPI3 526 aa15.83■□□□□ 0.12
RPUSD3-210ENST00000460909 A0A0B4J2A0 478 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 INS-IGF2F8WCM5 200 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 LYRM1O43325 122 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 PPP1R1AQ13522 171 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 ANKRD55Q3KP44 614 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 NMSQ5H8A3 153 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 CCDC140Q96MF4 163 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 SHPKQ9UHJ6 478 aa15.82■□□□□ 0.12
RPUSD3-210ENST00000460909 MFSD2BA6NFX1 497 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 BMPR1BO00238 502 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 OVOL1O14753 267 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 SFT2D2O95562 160 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 MECP2P51608 486 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 UBE2MP61081 183 aaKnown RBP15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 SRPXP78539 464 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 KLF5Q13887 457 aaPredicted RBP15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 SPINK9Q5DT21 86 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 LGI3Q8N145 548 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 LRTM2Q8N967 370 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 ZNF114Q8NC26 417 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 CACNG5Q9UF02 275 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 S4R3C0 116 aa15.81■□□□□ 0.12
RPUSD3-210ENST00000460909 SEC14L6B5MCN3 397 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 IFNA17P01571 189 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 IGHV3-23P01764 117 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 ZP3P21754 424 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 VAMP1P23763 118 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 EGFEM1PQ0D2K5 195 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 ZNF846Q147U1 533 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 PDLIM3Q53GG5 364 aaPredicted RBP15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 SLC25A24Q6NUK1 477 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 OR1P1Q8NH06 330 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 OR52E5Q8NH55 327 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 GPR61Q9BZJ8 451 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 WDR12Q9GZL7 423 aaKnown RBP15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 PLEKHA3Q9HB20 300 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 THYN1Q9P016 225 aa15.8■□□□□ 0.12
RPUSD3-210ENST00000460909 FAM209BQ5JX69 171 aa15.79■□□□□ 0.12
RPUSD3-210ENST00000460909 OR1L6Q8NGR2 347 aa15.79■□□□□ 0.12
RPUSD3-210ENST00000460909 EEF1AKMT3Q96AZ1 226 aa15.79■□□□□ 0.12
RPUSD3-210ENST00000460909 CXorf58Q96LI9 332 aa15.79■□□□□ 0.12
RPUSD3-210ENST00000460909 TBC1D24Q9ULP9 559 aa15.79■□□□□ 0.12
RPUSD3-210ENST00000460909 DUXBA0A1W2PPF3 345 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 C9orf170A2RU37 121 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 PPP5D1E7EU14 171 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 CYB5BO43169 146 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 KRTAP10-11P60412 298 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 SPCS3P61009 180 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 C9orf66Q5T8R8 295 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 ACSM6Q6P461 480 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 ZNF502Q8TBZ5 544 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 VN1R17PQ8TDU5 208 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 PDCD10Q9BUL8 212 aa15.78■□□□□ 0.12
RPUSD3-210ENST00000460909 TRBV7-1A0A0A6YYK4 115 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 K7EIM0 57 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 UPK1BO75841 260 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 OR4E1P0C645 316 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 SULT1A3P0DMM9 295 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 SULT1A4P0DMN0 295 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 ANXA7P20073 488 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 ERHP84090 104 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 IFITM3Q01628 133 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 PVRIGQ6DKI7 326 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 CLEC19AQ6UXS0 136 aa15.77■□□□□ 0.12
RPUSD3-210ENST00000460909 PRKDCP78527 4128 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 PIGBOS1A0A0B4J2F0 54 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 PRB2P02812 416 aaPredicted RBP15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 TCRBP04435 133 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 SYNJ2BPP57105 145 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 DHRS2Q13268 280 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 SMCO1Q147U7 214 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 RPEL1Q2QD12 228 aa15.76■□□□□ 0.11
RPUSD3-210ENST00000460909 F8W735 103 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 HLA-AP01891 365 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 RNASE2P10153 161 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 INSL3P51460 131 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 ASAH1Q13510 395 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 BSXQ3C1V8 233 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 IL34Q6ZMJ4 242 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 SCARB1Q8WTV0 552 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 C20orf85Q9H1P6 137 aa15.75■□□□□ 0.11
RPUSD3-210ENST00000460909 IGHV3-21A0A0B4J1V1 117 aa15.74■□□□□ 0.11
RPUSD3-210ENST00000460909 A0A1B0GU03 582 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms