RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 NDUFA3O95167 84 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 OR13C7P0DN81 318 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 LINC00052Q96N35 136 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 BEX4Q9NWD9 120 aaPredicted RBP13.86□□□□□ -0.19
CDK11A-209ENST00000460465 KIAA1456Q9P272 454 aa13.86□□□□□ -0.19
CDK11A-209ENST00000460465 A0A1B0GV50 99 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 SSBP2P81877 361 aaPredicted RBP13.85□□□□□ -0.19
CDK11A-209ENST00000460465 SRSF3P84103 164 aaKnown RBP13.85□□□□□ -0.19
CDK11A-209ENST00000460465 DEFB113Q30KQ7 82 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 UQCC3Q6UW78 93 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 ZNF709Q8N972 641 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 REG1AP05451 166 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 AKR1C1Q04828 323 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 RUSC1-AS1Q66K80 236 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 BPIFCQ8NFQ6 507 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 NPVFQ9HCQ7 196 aa13.85□□□□□ -0.19
CDK11A-209ENST00000460465 IGHV3OR16-10A0A075B7F0 116 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 A0A096LNT2 108 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 B4DSR2 109 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 C17orf112F2Z3M2 114 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 H2AFB1P0C5Y9 115 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 ZP3P21754 424 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 EBI3Q14213 229 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 Q8N6K4 173 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 SVIPQ8NHG7 77 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 P2RX4Q99571 388 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 TRAV40A0A0B4J280 105 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 MPDU1O75352 247 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 APELAP0DMC3 54 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 CTRB1P17538 263 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 HIST2H2BCQ6DN03 193 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 CTRB2Q6GPI1 263 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 C1orf159Q96HA4 380 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 MGST2Q99735 147 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
CDK11A-209ENST00000460465 VPS13CQ709C8 3753 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 IGHV1-69DA0A0B4J2H0 117 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 IGHV1-69P01742 117 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 AREGP15514 252 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 TMEM11P17152 192 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 RAB2AP61019 212 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 FFAR4Q5NUL3 377 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 FAM120AOSQ5T036 256 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 SPSB3Q6PJ21 355 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 MRPL41Q8IXM3 137 aaKnown RBP13.83□□□□□ -0.2
CDK11A-209ENST00000460465 SRSF12Q8WXF0 261 aaKnown RBP13.83□□□□□ -0.2
CDK11A-209ENST00000460465 TENM4Q6N022 2769 aa13.83□□□□□ -0.2
CDK11A-209ENST00000460465 TEX22C9J3V5 150 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 FNDC10F2Z333 226 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 SUB1P53999 127 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDK11A-209ENST00000460465 ZNF726P1Q15940 193 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 NARS2Q96I59 477 aaKnown RBP13.82□□□□□ -0.2
CDK11A-209ENST00000460465 FAM96BQ9Y3D0 163 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
CDK11A-209ENST00000460465 ANKRD17O75179 2603 aaKnown RBP13.82□□□□□ -0.2
CDK11A-209ENST00000460465 USP9YO00507 2555 aaPredicted RBP13.82□□□□□ -0.2
CDK11A-209ENST00000460465 KRBOX1C9JBD0 128 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 CD69Q07108 199 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 MLANAQ16655 118 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 C5orf64Q2M2E5 130 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 LRRC75A-AS1Q8N1F1 130 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 COMMD1Q8N668 190 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 SFT2D1Q8WV19 159 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 C7orf69Q9H7B7 122 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 HIF1ANQ9NWT6 349 aa13.82□□□□□ -0.2
CDK11A-209ENST00000460465 CELSR2Q9HCU4 2923 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 CNIH1O95406 144 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 BRS3P32247 399 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 TEPPQ6URK8 271 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 SSX7Q7RTT5 188 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 RCC1LQ96I51 464 aaKnown RBP13.81□□□□□ -0.2
CDK11A-209ENST00000460465 GGTLC1Q9BX51 225 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 TREM1Q9NP99 234 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 NAV3Q8IVL0 2385 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 NCBP2LA6PVI3 153 aaKnown RBP13.81□□□□□ -0.2
CDK11A-209ENST00000460465 FAM106CPP0CH98 169 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 CCL20P78556 96 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 LFNGQ8NES3 379 aa13.81□□□□□ -0.2
CDK11A-209ENST00000460465 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
CDK11A-209ENST00000460465 TRAV20A0A0B4J274 112 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 TSPAN9O75954 239 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 IGHV4-38-2P0DP08 117 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 GAMTQ14353 236 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 C19orf35Q6ZS72 473 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 SLC16A13Q7RTY0 426 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 RPP25LQ8N5L8 163 aaKnown RBP13.8□□□□□ -0.2
CDK11A-209ENST00000460465 ZNF114Q8NC26 417 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 SSMEM1Q8WWF3 244 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 CSMD2Q7Z408 3487 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 MBP02144 154 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 OPRK1P41145 380 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 Q5PR19 223 aa13.8□□□□□ -0.2
CDK11A-209ENST00000460465 LINC01356Q8N9X3 169 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms