RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ATP6V0BQ99437 205 aa17.44■□□□□ 0.38
PTPN4-208ENST00000460289 PRRT1Q99946 306 aa17.44■□□□□ 0.38
PTPN4-208ENST00000460289 TECRQ9NZ01 308 aaKnown RBP17.44■□□□□ 0.38
PTPN4-208ENST00000460289 C14orf166Q9Y224 244 aaKnown RBP17.44■□□□□ 0.38
PTPN4-208ENST00000460289 U3KQK5 164 aa17.44■□□□□ 0.38
PTPN4-208ENST00000460289 GPR183P32249 361 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 AKR1C2P52895 323 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 PRCDQ00LT1 54 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 TRIM16LQ309B1 348 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 ADAMTSL5Q6ZMM2 481 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 GTSCR1Q86UQ5 136 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 OR4C16Q8NGL9 310 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 OR1P1Q8NH06 330 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 SOSTQ9BQB4 213 aa17.43■□□□□ 0.38
PTPN4-208ENST00000460289 ANKRD20A5PA0PJZ0 165 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 A8MZ25 164 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 CBLN1P23435 193 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 MFAP2P55001 183 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 DEFB114Q30KQ6 69 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 CD300EQ496F6 205 aaPredicted RBP17.42■□□□□ 0.38
PTPN4-208ENST00000460289 PALMDQ9NP74 551 aa17.42■□□□□ 0.38
PTPN4-208ENST00000460289 IZUMO1RA6ND01 250 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 A8MWP6 167 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 TGOLN2O43493 480 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 IGKV1-5P01602 117 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 IGHV4-30-4P0DP06 118 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 UCP1P25874 307 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 ERHP84090 104 aaKnown RBP17.41■□□□□ 0.38
PTPN4-208ENST00000460289 SP6Q3SY56 376 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 SBSPONQ8IVN8 264 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 OR2C3Q8N628 320 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 SCARB1Q8WTV0 552 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 BSCL2Q96G97 398 aaPredicted RBP17.41■□□□□ 0.38
PTPN4-208ENST00000460289 WWC2-AS2Q96NR7 200 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 RTBDNQ9BSG5 229 aaPredicted RBP17.41■□□□□ 0.38
PTPN4-208ENST00000460289 ZC4H2Q9NQZ6 224 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 C21orf62Q9NYP8 219 aa17.41■□□□□ 0.38
PTPN4-208ENST00000460289 TEX13DA0A0J9YY54 714 aaPredicted RBP17.4■□□□□ 0.38
PTPN4-208ENST00000460289 SPSB3Q6PJ21 355 aa17.4■□□□□ 0.38
PTPN4-208ENST00000460289 RRNAD1Q96FB5 475 aaKnown RBP17.4■□□□□ 0.38
PTPN4-208ENST00000460289 THAP7Q9BT49 309 aaPredicted RBP17.4■□□□□ 0.38
PTPN4-208ENST00000460289 PLEKHA3Q9HB20 300 aa17.4■□□□□ 0.38
PTPN4-208ENST00000460289 SCP2D1Q9UJQ7 156 aa17.4■□□□□ 0.38
PTPN4-208ENST00000460289 GPR132Q9UNW8 380 aa17.4■□□□□ 0.38
PTPN4-208ENST00000460289 OR2T8A6NH00 312 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 P0C879 139 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 ZNF114Q8NC26 417 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 OR51S1Q8NGJ8 323 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 MARC2Q969Z3 335 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 SCGB3A2Q96PL1 93 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 PDCD10Q9BUL8 212 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 TMEM222Q9H0R3 208 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 C5orf66Q9H5L9 145 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 GAR1Q9NY12 217 aaKnown RBP17.39■□□□□ 0.37
PTPN4-208ENST00000460289 SLC2A8Q9NY64 477 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 UFC1Q9Y3C8 167 aa17.39■□□□□ 0.37
PTPN4-208ENST00000460289 A0A0B4J293 547 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 TMEM213A2RRL7 107 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 K7EIM0 57 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 CDS2O95674 445 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 S100A5P33763 92 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 ELLP55199 621 aaPredicted RBP17.38■□□□□ 0.37
PTPN4-208ENST00000460289 DHODHQ02127 395 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 IZUMO4Q1ZYL8 232 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 RNASE11Q8TAA1 199 aaKnown RBP17.38■□□□□ 0.37
PTPN4-208ENST00000460289 ZNF436Q9C0F3 470 aaPredicted RBP17.38■□□□□ 0.37
PTPN4-208ENST00000460289 NAA60Q9H7X0 242 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 C19orf73Q9NVV2 129 aa17.38■□□□□ 0.37
PTPN4-208ENST00000460289 IGHV3-21A0A0B4J1V1 117 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 ZNF785A8K8V0 405 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 IFNA17P01571 189 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 OR5AC1P0C628 307 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 UNQ9165/PRO28630Q6UXU0 137 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 FAM219AQ8IW50 185 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 UXS1Q8NBZ7 420 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 ZMAT4Q9H898 229 aa17.37■□□□□ 0.37
PTPN4-208ENST00000460289 MRPL27Q9P0M9 148 aaKnown RBP17.37■□□□□ 0.37
PTPN4-208ENST00000460289 IGHV3-35A0A0C4DH35 117 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 ZNF701M0R085 212 aaPredicted RBP17.36■□□□□ 0.37
PTPN4-208ENST00000460289 EDN2P20800 178 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 SNCAP37840 140 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 TM4SF20Q53R12 229 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 Q56UQ5 140 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 ZNF57Q68EA5 555 aaPredicted RBP17.36■□□□□ 0.37
PTPN4-208ENST00000460289 SLC35G3Q8N808 338 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 UBAC2Q8NBM4 344 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 GLYATL2Q8WU03 294 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 CACNG8Q8WXS5 425 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 MISP3Q96FF7 219 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 TUBA4BQ9H853 241 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 MCUBQ9NWR8 336 aa17.36■□□□□ 0.37
PTPN4-208ENST00000460289 CRYM-AS1A6NIL9 109 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 INS-IGF2F8WCM5 200 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 NDUFA4O00483 81 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 ST8SIA3O43173 380 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 C8orf88P0DMB2 117 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 CD81P60033 236 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 GUCA2BQ16661 112 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 PYDC2Q56P42 97 aa17.35■□□□□ 0.37
PTPN4-208ENST00000460289 TXN2Q99757 166 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms