RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ZNF436Q9C0F3 470 aaPredicted RBP12.16□□□□□ -0.46
SDF4-204ENST00000459994 A0A1B0GW64 132 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 MSGN1A6NI15 193 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 E7EUB6 86 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 INS-IGF2F8WCM5 200 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 AP4M1O00189 453 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 MED6O75586 246 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.46
SDF4-204ENST00000459994 NKX2-1P43699 371 aaPredicted RBP12.15□□□□□ -0.46
SDF4-204ENST00000459994 BCAP31P51572 246 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
SDF4-204ENST00000459994 C8orf86Q6ZUL3 223 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
SDF4-204ENST00000459994 STPG2Q8N412 459 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 LINC00482Q8N8I6 264 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 GRPEL2Q8TAA5 225 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 MRAPQ8TCY5 172 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 PARP11Q9NR21 331 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
SDF4-204ENST00000459994 hCG_2014768A0A024R1R8 64 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 A0A1W2PN81 502 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 LY86O95711 162 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
SDF4-204ENST00000459994 CHRNA7P36544 502 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
SDF4-204ENST00000459994 AKIRIN2Q53H80 203 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
SDF4-204ENST00000459994 ABHD5Q8WTS1 349 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
SDF4-204ENST00000459994 IGLC7A0M8Q6 106 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 CEBPZOSA8MTT3 80 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 SYNGR2O43760 224 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
SDF4-204ENST00000459994 RAP2BP61225 183 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
SDF4-204ENST00000459994 RBKSQ9H477 322 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 PLEKHA3Q9HB20 300 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 ENY2Q9NPA8 101 aa12.13□□□□□ -0.47
SDF4-204ENST00000459994 TRAV41A0A0B4J266 112 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 K7EIL1 84 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 NXPH3O95157 252 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 SCGB1D2O95969 90 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 RPLP1P05386 114 aaKnown RBP12.12□□□□□ -0.47
SDF4-204ENST00000459994 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
SDF4-204ENST00000459994 WT1-ASQ06250 92 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 TTC9CQ8N5M4 171 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 KLHL30-AS1Q8NEE0 82 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 OR10W1Q8NGF6 305 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
SDF4-204ENST00000459994 WDR89Q96FK6 387 aaPredicted RBP12.12□□□□□ -0.47
SDF4-204ENST00000459994 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
SDF4-204ENST00000459994 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 K7EPK0 472 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 WRBO00258 174 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 CRYGCP07315 174 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 OR13C7P0DN81 318 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 AREGP15514 252 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 PSMB6P28072 239 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
SDF4-204ENST00000459994 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
SDF4-204ENST00000459994 CFHR3Q02985 330 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 RAB32Q13637 225 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 UNQ5815/PRO19632Q6UWF5 114 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 GON7Q9BXV9 100 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 HIPK2Q9H2X6 1198 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
SDF4-204ENST00000459994 RCL1Q9Y2P8 373 aaKnown RBP12.11□□□□□ -0.47
SDF4-204ENST00000459994 WSB1Q9Y6I7 421 aa12.11□□□□□ -0.47
SDF4-204ENST00000459994 G3V318 75 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 RLN2P04090 185 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 CTRB1P17538 263 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
SDF4-204ENST00000459994 ATP5IP56385 69 aaPredicted RBP12.1□□□□□ -0.47
SDF4-204ENST00000459994 TAS2R30P59541 319 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 CTRB2Q6GPI1 263 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 RCC1LQ96I51 464 aaKnown RBP12.1□□□□□ -0.47
SDF4-204ENST00000459994 RAX2Q96IS3 184 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 SMIM8Q96KF7 97 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 P2RX4Q99571 388 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 C11orf1Q9H5F2 150 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 LSM5Q9Y4Y9 91 aaKnown RBP12.1□□□□□ -0.47
SDF4-204ENST00000459994 DNAH9Q9NYC9 4486 aa12.1□□□□□ -0.47
SDF4-204ENST00000459994 NUDT19A8MXV4 375 aa12.09□□□□□ -0.47
SDF4-204ENST00000459994 BRI3O95415 125 aa12.09□□□□□ -0.47
SDF4-204ENST00000459994 MPC2O95563 127 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms