RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CTSBP07858 339 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 CX3CL1P78423 397 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 FAM219BQ5XKK7 198 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 UNQ6494/PRO21346Q6UXR6 183 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 ZNF525Q8N782 197 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 CACNG8Q8WXS5 425 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PIEZO1Q92508 2521 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 SEC16AO15027 2179 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 A0A0G2JMM0 328 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 A0A1W2PPB8 328 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 KIR3DP1A8MWS1 328 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 WNT9BO14905 357 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PRKNO60260 465 aaPredicted RBP8.28□□□□□ -1.08
UFD1-205ENST00000459854 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 C18orf12Q96KH6 178 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 GPR82Q96P67 336 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 NEU1Q99519 415 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PRDM14Q9GZV8 571 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 PHLDA3Q9Y5J5 127 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 COX11Q9Y6N1 276 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 LRRK1Q38SD2 2015 aa8.28□□□□□ -1.08
UFD1-205ENST00000459854 IGLV3-12A0A075B6K2 115 aa8.27□□□□□ -1.08
UFD1-205ENST00000459854 A0A0G2JLM5 398 aa8.27□□□□□ -1.08
UFD1-205ENST00000459854 PTGDSP41222 190 aa8.27□□□□□ -1.08
UFD1-205ENST00000459854 NUP37Q8NFH4 326 aa8.27□□□□□ -1.08
UFD1-205ENST00000459854 SPTBN2O15020 2390 aa8.27□□□□□ -1.08
UFD1-205ENST00000459854 ZG16O60844 167 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 SS18L1O75177 396 aaPredicted RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 MMP23AO75900 390 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 CT83Q5H943 113 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 ZNF818PQ6ZRF7 136 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 ZNF488Q96MN9 340 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 PLXND1Q9Y4D7 1925 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 TNRC18O15417 2968 aaPredicted RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 A0A1B0GWJ7 208 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 NKX2-8O15522 239 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 NDUFS6O75380 124 aaKnown RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 GNRHR2Q96P88 292 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 ZNF703Q9H7S9 590 aaPredicted RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 HS3ST3B1Q9Y662 390 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 PCNX2A6NKB5 2137 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 TSPOP30536 169 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 IGF2-ASQ6U949 168 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 ZNF441Q8N8Z8 693 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 NHP2Q9NX24 153 aaKnown RBP8.27□□□□□ -1.09
UFD1-205ENST00000459854 FANCMQ8IYD8 2048 aa8.27□□□□□ -1.09
UFD1-205ENST00000459854 IGHV1-45A0A0A0MS14 117 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 A0A1W2PRE2 83 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 IL11P20809 199 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 MFAP4P55083 255 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 METTL26Q96S19 204 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 CEP192Q8TEP8 1941 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
UFD1-205ENST00000459854 FAM90A9PA6NNJ1 464 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 IGHV2-70P01814 119 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 FOXC2Q99958 501 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 KBTBD11-OT1A0A1B0GTJ5 212 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 OR2H2O95918 312 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 MEIG1Q5JSS6 88 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 TPTE2P1Q5T6R2 138 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 ZAR1Q86SH2 424 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 RASL10BQ96S79 203 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 TIMP4Q99727 224 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 SHISA3A0PJX4 238 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 C9JCJ5 164 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 MPV17P39210 176 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 ZNF585BQ52M93 769 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
UFD1-205ENST00000459854 RBMY1BA6NDE4 496 aaKnown RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 RBMY1EA6NEQ0 496 aaKnown RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 RBMY1DP0C7P1 496 aaKnown RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 RBMY1A1P0DJD3 496 aaKnown RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 SSTR5P35346 364 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 ATXN8Q156A1 80 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 TNFRSF14Q92956 283 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 SLX1AQ9BQ83 275 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 SCN8AQ9UQD0 1980 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 PCM1Q15154 2024 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 GAGE12BA1L429 117 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 A6NNC1 897 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 ATXN7O15265 892 aaPredicted RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 NTN1O95631 604 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 GPX1P07203 203 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 OR9G9P0C7N8 305 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 RND2P52198 227 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 PPP1R32Q7Z5V6 425 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 ZNF205O95201 554 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 MBNL2Q5VZF2 373 aaKnown RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
UFD1-205ENST00000459854 BHLHA15Q7RTS1 189 aaPredicted RBP8.25□□□□□ -1.09
UFD1-205ENST00000459854 TMEM52Q8NDY8 209 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms