RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TAS2R19P59542 299 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 HSPE1P61604 102 aaKnown RBP7.53□□□□□ -1.2
HDLBP-228ENST00000459788 PRCDQ00LT1 54 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 SLC25A24Q6NUK1 477 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 OR2C3Q8N628 320 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 TMEM229BQ8NBD8 167 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 UXS1Q8NBZ7 420 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 OR4A16Q8NH70 328 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 ZFAND1Q8TCF1 268 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 SPAG8Q99932 426 aaPredicted RBP7.53□□□□□ -1.2
HDLBP-228ENST00000459788 DAZ1Q9NQZ3 744 aaKnown RBP7.53□□□□□ -1.2
HDLBP-228ENST00000459788 C21orf62Q9NYP8 219 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 CACFD1Q9UGQ2 172 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 LYSTQ99698 3801 aa7.53□□□□□ -1.2
HDLBP-228ENST00000459788 C15orf62A8K5M9 175 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 OR11H12B2RN74 326 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 CD5P06127 495 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 RELQ04864 619 aaPredicted RBP7.52□□□□□ -1.21
HDLBP-228ENST00000459788 MEF2DQ14814 521 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 SURF2Q15527 256 aaPredicted RBP7.52□□□□□ -1.21
HDLBP-228ENST00000459788 GUCA2BQ16661 112 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 PHLDA2Q53GA4 152 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 LAMTOR1Q6IAA8 161 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 RBPMS2Q6ZRY4 209 aaKnown RBP7.52□□□□□ -1.21
HDLBP-228ENST00000459788 GPR141Q7Z602 305 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 CCDC71LQ8N9Z2 235 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 TERB2Q8NHR7 220 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 SCARB1Q8WTV0 552 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 RAB2BQ8WUD1 216 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 EXTL2Q9UBQ6 330 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 KLK11Q9UBX7 282 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 MLXQ9UH92 298 aa7.52□□□□□ -1.21
HDLBP-228ENST00000459788 DYNC2H1Q8NCM8 4307 aaKnown RBP7.52□□□□□ -1.21
HDLBP-228ENST00000459788 K7EIM0 57 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 CORTO00230 105 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 TSPAN4O14817 238 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 CTDSPLO15194 276 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 CD7P09564 240 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 MFAP2P55001 183 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 TMBIM6P55061 237 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 MFAP4P55083 255 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 CMC4P56277 68 aaPredicted RBP7.51□□□□□ -1.21
HDLBP-228ENST00000459788 ERHP84090 104 aaKnown RBP7.51□□□□□ -1.21
HDLBP-228ENST00000459788 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 PVRIGQ6DKI7 326 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 UNQ9165/PRO28630Q6UXU0 137 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 FAM219AQ8IW50 185 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 OR52B4Q8NGK2 314 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 OR52I2Q8NH67 350 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 WDR89Q96FK6 387 aaPredicted RBP7.51□□□□□ -1.21
HDLBP-228ENST00000459788 HINT2Q9BX68 163 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 HIPK2Q9H2X6 1198 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 PLEKHA3Q9HB20 300 aa7.51□□□□□ -1.21
HDLBP-228ENST00000459788 RYR3Q15413 4870 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 C3orf85A0A1B0GTC6 90 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 OR2T8A6NH00 312 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 F8W735 103 aaPredicted RBP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 I3L2K1 104 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 NUPL2O15504 423 aaKnown RBP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 IGKV1-39P01597 117 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 CD3DP04234 171 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 IGKV1D-39P04432 117 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 CTSDP07339 412 aaPredicted RBP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 CTSGP08311 255 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 P0C879 139 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 PGAM2P15259 253 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 UCP1P25874 307 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 BMI1P35226 326 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 PIGPP57054 158 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 AARDQ4LEZ3 155 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 SMIM4Q8WVI0 70 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 OR10C1Q96KK4 312 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 ABHD1Q96SE0 405 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 NAA50Q9GZZ1 169 aaKnown RBP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 CCDC59Q9P031 241 aaKnown RBP7.5□□□□□ -1.21
HDLBP-228ENST00000459788 COPZ2Q9P299 210 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 NSG2Q9Y328 171 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 S4R3C0 116 aa7.5□□□□□ -1.21
HDLBP-228ENST00000459788 LOC102724200A0A096LPH7 203 aaPredicted RBP7.49□□□□□ -1.21
HDLBP-228ENST00000459788 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 RBMY1BA6NDE4 496 aaKnown RBP7.49□□□□□ -1.21
HDLBP-228ENST00000459788 RBMY1EA6NEQ0 496 aaKnown RBP7.49□□□□□ -1.21
HDLBP-228ENST00000459788 OR4C46A6NHA9 309 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 DBX1A6NMT0 343 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 M0QYG6 137 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 UBE2CO00762 179 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 RAB3DO95716 219 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 RBMY1DP0C7P1 496 aaKnown RBP7.49□□□□□ -1.21
HDLBP-228ENST00000459788 ADMP35318 185 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 NPBWR1P48145 328 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 DHODHQ02127 395 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 Q56UQ5 140 aa7.49□□□□□ -1.21
HDLBP-228ENST00000459788 STEAP1BQ6NZ63 245 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms