RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ACP1P24666 158 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 THBS3P49746 956 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 COX19Q49B96 90 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 PRAMEF5Q5TYX0 476 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 PRAMEF6Q5VXH4 476 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 SHISA2Q6UWI4 295 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 WDR82Q6UXN9 313 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 ZNF826PQ6ZT77 177 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 FAM90A1Q86YD7 464 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 Q8N976 141 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 ZNF738Q8NE65 137 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 OR4B1Q8NGF8 309 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 OR4A16Q8NH70 328 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 KLF14Q8TD94 323 aaPredicted RBP7.01□□□□□ -1.29
VPS50-208ENST00000458707 UHRF2Q96PU4 802 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 OR2V2Q96R30 315 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 CXXC4Q9H2H0 198 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 HEYLQ9NQ87 328 aaPredicted RBP7.01□□□□□ -1.29
VPS50-208ENST00000458707 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 DSCAMO60469 2012 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 FASNP49327 2511 aaKnown RBP7□□□□□ -1.29
VPS50-208ENST00000458707 FREM2Q5SZK8 3169 aa7□□□□□ -1.29
VPS50-208ENST00000458707 ANKRD11Q6UB99 2663 aaPredicted RBP7□□□□□ -1.29
VPS50-208ENST00000458707 IGHV3-43A0A0B4J1X8 118 aa7□□□□□ -1.29
VPS50-208ENST00000458707 IGHV2OR16-5A0A0B4J2B6 119 aa7□□□□□ -1.29
VPS50-208ENST00000458707 IGHV3-64DA0A0J9YX35 117 aa7□□□□□ -1.29
VPS50-208ENST00000458707 PATE3B3GLJ2 98 aa7□□□□□ -1.29
VPS50-208ENST00000458707 F2Z2F3 143 aa7□□□□□ -1.29
VPS50-208ENST00000458707 FNDC10F2Z333 226 aa7□□□□□ -1.29
VPS50-208ENST00000458707 FCN1O00602 326 aa7□□□□□ -1.29
VPS50-208ENST00000458707 SPINT2O43291 252 aa7□□□□□ -1.29
VPS50-208ENST00000458707 FCGR3BO75015 233 aa7□□□□□ -1.29
VPS50-208ENST00000458707 REG1AP05451 166 aa7□□□□□ -1.29
VPS50-208ENST00000458707 IGHV3-43DP0DP04 118 aa7□□□□□ -1.29
VPS50-208ENST00000458707 MPV17P39210 176 aa7□□□□□ -1.29
VPS50-208ENST00000458707 CTRLP40313 264 aa7□□□□□ -1.29
VPS50-208ENST00000458707 IER3P46695 156 aa7□□□□□ -1.29
VPS50-208ENST00000458707 GPR12P47775 334 aa7□□□□□ -1.29
VPS50-208ENST00000458707 CR1LQ2VPA4 569 aa7□□□□□ -1.29
VPS50-208ENST00000458707 FBLN7Q53RD9 439 aa7□□□□□ -1.29
VPS50-208ENST00000458707 OR10J3Q5JRS4 329 aa7□□□□□ -1.29
VPS50-208ENST00000458707 XP32Q5T750 250 aa7□□□□□ -1.29
VPS50-208ENST00000458707 LRP11Q86VZ4 500 aa7□□□□□ -1.29
VPS50-208ENST00000458707 BAGE3Q86Y29 109 aa7□□□□□ -1.29
VPS50-208ENST00000458707 BAGE2Q86Y30 109 aa7□□□□□ -1.29
VPS50-208ENST00000458707 VN1R17PQ8TDU5 208 aa7□□□□□ -1.29
VPS50-208ENST00000458707 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
VPS50-208ENST00000458707 MRPL27Q9P0M9 148 aaKnown RBP7□□□□□ -1.29
VPS50-208ENST00000458707 SLC25A10Q9UBX3 287 aaPredicted RBP7□□□□□ -1.29
VPS50-208ENST00000458707 PAM16Q9Y3D7 125 aa7□□□□□ -1.29
VPS50-208ENST00000458707 SNURFLB1AK76 121 aa7□□□□□ -1.29
VPS50-208ENST00000458707 KIR2DS2P43631 304 aa7□□□□□ -1.29
VPS50-208ENST00000458707 MEOX1P50221 254 aa7□□□□□ -1.29
VPS50-208ENST00000458707 CX3CL1P78423 397 aa7□□□□□ -1.29
VPS50-208ENST00000458707 INO80CQ6PI98 192 aaPredicted RBP7□□□□□ -1.29
VPS50-208ENST00000458707 TEPPQ6URK8 271 aa7□□□□□ -1.29
VPS50-208ENST00000458707 VASH2Q86V25 355 aa7□□□□□ -1.29
VPS50-208ENST00000458707 STPG3Q8N7X2 389 aa7□□□□□ -1.29
VPS50-208ENST00000458707 MDS2Q8NDY4 140 aa7□□□□□ -1.29
VPS50-208ENST00000458707 OR4C5Q8NGB2 326 aa7□□□□□ -1.29
VPS50-208ENST00000458707 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
VPS50-208ENST00000458707 FBXL7Q9UJT9 491 aa7□□□□□ -1.29
VPS50-208ENST00000458707 JPT1Q9UK76 154 aa7□□□□□ -1.29
VPS50-208ENST00000458707 TCF19Q9Y242 345 aa7□□□□□ -1.29
VPS50-208ENST00000458707 KLF13Q9Y2Y9 288 aaPredicted RBP7□□□□□ -1.29
VPS50-208ENST00000458707 DYSFO75923 2080 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 DEFB108AA8MXU0 73 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 M0QZ24 198 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 FRMD6-AS1P0C7T7 363 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 IGHV1-2P23083 117 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 ERVK-16P61578 105 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 SPATA31B1PQ5VZV4 182 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 CXorf67Q86X51 503 aaPredicted RBP6.99□□□□□ -1.29
VPS50-208ENST00000458707 C1orf174Q8IYL3 243 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 ABHD12Q8N2K0 398 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 TPRX1Q8N7U7 411 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 SIGLECL1Q8N7X8 197 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 ST6GALNAC3Q8NDV1 305 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 RFESDQ8TAC1 157 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 DDB2Q92466 427 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 GNB4Q9HAV0 340 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 OSTCQ9NRP0 149 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 SLC45A2Q9UMX9 530 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 RAI1Q7Z5J4 1906 aaPredicted RBP6.99□□□□□ -1.29
VPS50-208ENST00000458707 NCOR2Q9Y618 2525 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 ACACBO00763 2458 aa6.99□□□□□ -1.29
VPS50-208ENST00000458707 PRR14LQ5THK1 2151 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TRAV3A0A0B4J244 114 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 C15orf61A6NNL5 157 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 KLRC4-KLRK1H3BQV0 150 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 CORTO00230 105 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TFF1P04155 84 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 HOXA4Q00056 320 aaPredicted RBP6.98□□□□□ -1.29
VPS50-208ENST00000458707 RAB31Q13636 194 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 TMEM136Q6ZRR5 245 aa6.98□□□□□ -1.29
VPS50-208ENST00000458707 OR8I2Q8N0Y5 310 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms