RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ENY2Q9NPA8 101 aa13.14□□□□□ -0.31
TRIM39-211ENST00000458516 SYNGR2O43760 224 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 MED6O75586 246 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 BRI3O95415 125 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 SCGB1D2O95969 90 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 PF4V1P10720 104 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 CXCL3P19876 107 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 MFAP2P55001 183 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 POLR2GP62487 172 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 ERHP84090 104 aaKnown RBP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 SRSF4Q08170 494 aaKnown RBP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 KRTAP21-3Q3LHN1 58 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 WDR89Q96FK6 387 aaPredicted RBP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 FANCD2OSQ96PS1 177 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 P2RX4Q99571 388 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
TRIM39-211ENST00000458516 F11RQ9Y624 299 aaKnown RBP13.13□□□□□ -0.31
TRIM39-211ENST00000458516 RPLP1P05386 114 aaKnown RBP13.12□□□□□ -0.31
TRIM39-211ENST00000458516 RNASE2P10153 161 aaKnown RBP13.12□□□□□ -0.31
TRIM39-211ENST00000458516 IAPPP10997 89 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 RAB9AP51151 201 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 DEFA5Q01523 94 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 C12orf54Q6X4T0 127 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 C11orf44Q8N8P7 122 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 MS4A10Q96PG2 267 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 NMES1Q9C002 83 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
TRIM39-211ENST00000458516 ZNF355PQ9NSJ1 428 aa13.12□□□□□ -0.31
TRIM39-211ENST00000458516 RCL1Q9Y2P8 373 aaKnown RBP13.12□□□□□ -0.31
TRIM39-211ENST00000458516 IGLV11-55A0A075B6I3 123 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 K7EPK0 472 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 TRGV3P03979 118 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 CD83Q01151 205 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
TRIM39-211ENST00000458516 OR1P1Q8NH06 330 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 CITED1Q99966 193 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 SLA2Q9H6Q3 261 aa13.11□□□□□ -0.31
TRIM39-211ENST00000458516 WRBO00258 174 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 SSSCA1O60232 199 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 DEFA4P12838 97 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 TPPP2P59282 170 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 RAB32Q13637 225 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 SLC24A4Q8NFF2 622 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 TMEM170AQ8WVE7 144 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
TRIM39-211ENST00000458516 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 HIPK2Q9H2X6 1198 aa13.1□□□□□ -0.31
TRIM39-211ENST00000458516 LSM5Q9Y4Y9 91 aaKnown RBP13.1□□□□□ -0.31
TRIM39-211ENST00000458516 COL6A5A8TX70 2615 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 OR2J3O76001 311 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 TMEM50AO95807 157 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 HIST1H1BP16401 226 aaKnown RBP13.09□□□□□ -0.31
TRIM39-211ENST00000458516 SNCAP37840 140 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 HTR2BP41595 481 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 RHOGP84095 191 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 CYCSP99999 105 aaKnown RBP13.09□□□□□ -0.31
TRIM39-211ENST00000458516 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
TRIM39-211ENST00000458516 C11orf1Q9H5F2 150 aa13.09□□□□□ -0.31
TRIM39-211ENST00000458516 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 ADARB2-AS1A8MUL3 147 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 NDUFB8O95169 186 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 NPY1RP25929 384 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 PAX9P55771 341 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 S100A10P60903 97 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 RPL23AP62750 156 aaKnown RBP13.08□□□□□ -0.32
TRIM39-211ENST00000458516 C2orf83Q53S99 150 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 SLC25A24Q6NUK1 477 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 OR1L6Q8NGR2 347 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 ZNF436Q9C0F3 470 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-211ENST00000458516 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 U3KQ87 197 aa13.08□□□□□ -0.32
TRIM39-211ENST00000458516 FAM223BA6NKX1 122 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 C15orf62A8K5M9 175 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 LY86O95711 162 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 IFNA10P01566 189 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 SUB1P53999 127 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRIM39-211ENST00000458516 LRRC37A5PQ49AS3 106 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 C18orf65Q6ZTR6 163 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 FAM223AQ8IWN6 122 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 CHAC2Q8WUX2 184 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 PPP1R1CQ8WVI7 109 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 SMIM8Q96KF7 97 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 OR4C12Q96R67 309 aa13.07□□□□□ -0.32
TRIM39-211ENST00000458516 ZFP57Q9NU63 452 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms