RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 FOXL1Q12952 345 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF146Q15072 292 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 ADIRFQ15847 76 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 Q8IYB0 196 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 RPEQ96AT9 228 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 FLYWCH2Q96CP2 140 aaKnown RBP9.74□□□□□ -0.85
SYNE2-207ENST00000458046 SLC25A22Q9H936 323 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 KCNIP1Q9NZI2 227 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 C12orf77C9JDV5 145 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 MPV17P39210 176 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-207ENST00000458046 CLEC12BQ2HXU8 276 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF383Q8NA42 475 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 GATAD1Q8WUU5 269 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 GALMQ96C23 342 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
SYNE2-207ENST00000458046 MYO18BQ8IUG5 2567 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 ARHGAP21Q5T5U3 1957 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 IGHV3-43A0A0B4J1X8 118 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 AGFG2O95081 481 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 S1PR2O95136 353 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 IGHV3-43DP0DP04 118 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 DEFA4P12838 97 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 CD81P60033 236 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 FOXC1Q12948 553 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 DHRS13Q6UX07 377 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 TMEM14EPQ6UXP3 125 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF645Q8N7E2 425 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 RFESDQ8TAC1 157 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
SYNE2-207ENST00000458046 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 VPREB3Q9UKI3 123 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 FZR1Q9UM11 496 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 ODAMA1E959 279 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 C17orf98A8MV24 154 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 DEFB108AA8MXU0 73 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 SEC14L6B5MCN3 397 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 ZG16O60844 167 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 TNFSF15O95150 251 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 IGHV1-2P23083 117 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 ARG2P78540 354 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 HIST3H2BBQ8N257 126 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 P2RX4Q99571 388 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 COL27A1Q8IZC6 1860 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-207ENST00000458046 PRR14LQ5THK1 2151 aa9.73□□□□□ -0.85
SYNE2-207ENST00000458046 RNF212BA8MTL3 300 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 WISP2O76076 250 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 IFNA1P01562 189 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 HBZP02008 142 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 FABP4P15090 132 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 GABRA2P47869 451 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 BRWD1-AS2P59051 145 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 USF3Q68DE3 2245 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 Q6ZR03 302 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 BCL6BQ8N143 479 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-207ENST00000458046 LAMP3Q9UQV4 416 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 DOCK11Q5JSL3 2073 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 TMEM30CPA0ZSE6 113 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 RND2P52198 227 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 PSG5Q15238 335 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 LTC4SQ16873 150 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 SMIM20Q8N5G0 67 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 KLF14Q8TD94 323 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-207ENST00000458046 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 TCF19Q9Y242 345 aa9.72□□□□□ -0.85
SYNE2-207ENST00000458046 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.85
SYNE2-207ENST00000458046 KIR2DL5BA0A0G2JN68 375 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 KIR2DL5BA0A0G2JPC4 375 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 OR5H1A6NKK0 313 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 LRRC30A6NM36 301 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 FGF7P21781 194 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.85
SYNE2-207ENST00000458046 TFF3Q07654 80 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 KIR2DL5AQ8N109 375 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 SFRP2Q96HF1 295 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 VPS25Q9BRG1 176 aa9.71□□□□□ -0.85
SYNE2-207ENST00000458046 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 MLNRO43193 412 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 SCGB1A1P11684 91 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 MSMO1Q15800 293 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 C16orf82Q7Z2V1 217 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 IL17DQ8TAD2 202 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 TIMD4Q96H15 378 aa9.71□□□□□ -0.86
SYNE2-207ENST00000458046 CD59P13987 128 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 PSMB3P49720 205 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 TGFBR3Q03167 851 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 CNEP1R1Q8N9A8 125 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR4F5Q8NH21 305 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 OR4F4Q96R69 305 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 DCTN5Q9BTE1 182 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 MSL2Q9HCI7 577 aa9.7□□□□□ -0.86
SYNE2-207ENST00000458046 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms