RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 TNFRSF9Q07011 255 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 H2BFWTQ7Z2G1 175 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 LYG2Q86SG7 212 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 WFDC3Q8IUB2 231 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 SAMD12Q8N8I0 201 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 SCARB1Q8WTV0 552 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 TMEM190Q8WZ59 177 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 MOB3AQ96BX8 217 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 MISP3Q96FF7 219 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 RNF167Q9H6Y7 350 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 NDUFA4L2Q9NRX3 87 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 NSG2Q9Y328 171 aa6.58□□□□□ -1.36
PKP4-207ENST00000457109 TRAV14DV4A0A0A6YYC5 116 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 DNASE2O00115 360 aaPredicted RBP6.57□□□□□ -1.36
PKP4-207ENST00000457109 ZNF207O43670 478 aaKnown RBP6.57□□□□□ -1.36
PKP4-207ENST00000457109 GNG7O60262 68 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 SCGB2A1O75556 95 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 ATG12O94817 140 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 IFNA4P05014 189 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 CTSDP07339 412 aaPredicted RBP6.57□□□□□ -1.36
PKP4-207ENST00000457109 HLA-DMAP28067 261 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 SNCAP37840 140 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 TAS2R20P59543 309 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 RPL11P62913 178 aaKnown RBP6.57□□□□□ -1.36
PKP4-207ENST00000457109 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 DEFB135Q30KP9 77 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 CEMP1Q6PRD7 247 aaPredicted RBP6.57□□□□□ -1.36
PKP4-207ENST00000457109 CADM3Q8N126 398 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 TMEM116Q8NCL8 245 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 OR1P1Q8NH06 330 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 SLC25A46Q96AG3 418 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 RNF183Q96D59 192 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 TXN2Q99757 166 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 GINS3Q9BRX5 216 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 PDCD10Q9BUL8 212 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 RHPN1-AS1Q9BWJ2 59 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 CSTL1Q9H114 145 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
PKP4-207ENST00000457109 IGKV3-7A0A075B6H7 116 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 IGHV3OR16-8A0A075B7F1 116 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 MPTX1A8MV57 137 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 NPBWR1P48145 328 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 TFPI2P48307 235 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 SUB1P53999 127 aaKnown RBP eCLIP6.56□□□□□ -1.36
PKP4-207ENST00000457109 PHLDA2Q53GA4 152 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 DUSP18Q8NEJ0 188 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 PINX1Q96BK5 328 aaKnown RBP6.56□□□□□ -1.36
PKP4-207ENST00000457109 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 ENY2Q9NPA8 101 aa6.56□□□□□ -1.36
PKP4-207ENST00000457109 FAM212BQ9NTI7 297 aaPredicted RBP6.56□□□□□ -1.36
PKP4-207ENST00000457109 HUWE1Q7Z6Z7 4374 aaKnown RBP6.56□□□□□ -1.36
PKP4-207ENST00000457109 IGHV7-4-1A0A0J9YVY3 117 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 CHEK1O14757 476 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 CTSGP08311 255 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 PGAM2P15259 253 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 NAT1P18440 290 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
PKP4-207ENST00000457109 HRH1P35367 487 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 RPS19P39019 145 aaKnown RBP6.55□□□□□ -1.36
PKP4-207ENST00000457109 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
PKP4-207ENST00000457109 LSM3P62310 102 aaKnown RBP6.55□□□□□ -1.36
PKP4-207ENST00000457109 KCTD21Q4G0X4 260 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 TBC1D26Q86UD7 250 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 GATAD1Q8WUU5 269 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 NARS2Q96I59 477 aaKnown RBP6.55□□□□□ -1.36
PKP4-207ENST00000457109 RARRES2Q99969 163 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 MFFQ9GZY8 342 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 TMEM231Q9H6L2 316 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 SCPEP1Q9HB40 452 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 COMMD3Q9UBI1 195 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 TNCP24821 2201 aa6.55□□□□□ -1.36
PKP4-207ENST00000457109 A0A087WXM4 84 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 A0A1W2PS18 150 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 FAM25AB3EWG3 89 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 FAM25CB3EWG5 89 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 FAM25GB3EWG6 89 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 K7EIM0 57 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 ST8SIA3O43173 380 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 MT-CO2P00403 227 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 IFNA17P01571 189 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 RCVRNP35243 200 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 ADMP35318 185 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 MZT2AQ6P582 158 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 SNX29P2Q8IUI4 249 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 APRG1Q8IVJ8 170 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 GBGT1Q8N5D6 347 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 SLC35G3Q8N808 338 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 RNASE11Q8TAA1 199 aaKnown RBP6.54□□□□□ -1.36
PKP4-207ENST00000457109 RNF2Q99496 336 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
PKP4-207ENST00000457109 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 CORTO00230 105 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 DFFBO76075 338 aa6.53□□□□□ -1.36
PKP4-207ENST00000457109 APOA1P02647 267 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms