RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 KIR3DL3Q8N743 410 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 C9orf106Q8NAJ2 232 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 C8orf46Q8TAG6 207 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 WFDC6Q9BQY6 131 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 CELA3BP08861 270 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 GPX4P36969 197 aaPredicted RBP8.52□□□□□ -1.05
SCN5A-210ENST00000455624 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 LINC00518Q8N0U6 118 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 SSC4DQ8WTU2 575 aa8.52□□□□□ -1.05
SCN5A-210ENST00000455624 CYB5R2Q6BCY4 276 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 ASCL4Q6XD76 172 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 SDHCQ99643 169 aaPredicted RBP8.51□□□□□ -1.05
SCN5A-210ENST00000455624 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 TMEM14DPA8MWL7 114 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 CCDC88CQ9P219 2028 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 IZUMO1RA6ND01 250 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
SCN5A-210ENST00000455624 SAP30O75446 220 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 CD8AP01732 235 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 IFI27P40305 119 aaPredicted RBP8.51□□□□□ -1.05
SCN5A-210ENST00000455624 MTURNQ8N3F0 131 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 NEUROG1Q92886 237 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 KLF4O43474 513 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 CBLN1P23435 193 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 TDGF1P3P51864 188 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 ERVK11-1P61568 191 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 DEFB121Q5J5C9 76 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 MSGN1A6NI15 193 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 CD33P20138 364 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
SCN5A-210ENST00000455624 SAA2-SAA4A0A096LPE2 208 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 TMEM50AO95807 157 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 SAA2P0DJI9 122 aaPredicted RBP8.5□□□□□ -1.05
SCN5A-210ENST00000455624 TTC9CQ8N5M4 171 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 ZNF585BQ52M93 769 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 CIARTQ8N365 385 aaPredicted RBP8.5□□□□□ -1.05
SCN5A-210ENST00000455624 TM2D1Q9BX74 207 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 C1QTNF5Q9BXJ0 243 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 PPP1R3EQ9H7J1 279 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 TRAV12-3A0A0B4J271 114 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 CA7P43166 264 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 PEF1Q9UBV8 284 aaKnown RBP8.5□□□□□ -1.05
SCN5A-210ENST00000455624 LDLRAD4O15165 306 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 EGR1P18146 543 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 GNG5P63218 68 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 LY6DQ14210 128 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 PRADC1Q9BSG0 188 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 VCX2Q9H322 139 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 ZNF98A6NK75 572 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 SLC17A3O00476 420 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 VENTXO95231 258 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 CD28P10747 220 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 PRR32B1ATL7 298 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 GCM2O75603 506 aaPredicted RBP8.5□□□□□ -1.05
SCN5A-210ENST00000455624 Q6AWC8 147 aa8.5□□□□□ -1.05
SCN5A-210ENST00000455624 MRPS18CQ9Y3D5 142 aaKnown RBP8.5□□□□□ -1.05
SCN5A-210ENST00000455624 SCN4AP35499 1836 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 PSCAO43653 123 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 FOXA3P55318 350 aaPredicted RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 CMC4P56277 68 aaPredicted RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 PAX2Q02962 417 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 EIF4EBP2Q13542 120 aaPredicted RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 PVRIGQ6DKI7 326 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 WNT2P09544 360 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 SIGLEC15Q6ZMC9 328 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 PUSL1Q8N0Z8 303 aaKnown RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 NPDC1Q9NQX5 325 aaPredicted RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 STRCP1A6NGW2 1772 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 DPRXA6NFQ7 191 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 PIN1P1O15428 100 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 SRD5A1P18405 259 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 C11orf44Q8N8P7 122 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 SCN1AP35498 2009 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 APCDD1LQ8NCL9 501 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 CTHRC1Q96CG8 243 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 A0A0G2JK05 382 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 UPK2O00526 184 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 SNAI2O43623 268 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 LILRA1O75019 489 aa8.49□□□□□ -1.05
SCN5A-210ENST00000455624 CHTOPQ9Y3Y2 248 aaKnown RBP8.49□□□□□ -1.05
SCN5A-210ENST00000455624 GREM1O60565 184 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 APOMO95445 188 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 ASCL2Q99929 193 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 SLC25A15Q9Y619 301 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 CSRP1P21291 193 aaKnown RBP8.48□□□□□ -1.05
SCN5A-210ENST00000455624 ATP5G3P48201 142 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 TMEM105Q8N8V8 129 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 RAMP1O60894 148 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 TMEM133Q9H2Q1 129 aa8.48□□□□□ -1.05
SCN5A-210ENST00000455624 SNRNP200O75643 2136 aaKnown RBP8.48□□□□□ -1.05
SCN5A-210ENST00000455624 TNS1Q9HBL0 1735 aaKnown RBP8.48□□□□□ -1.05
SCN5A-210ENST00000455624 TRAV40A0A0B4J280 105 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms