RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
CLCN1-203ENST00000455478 NMSQ5H8A3 153 aa11.33□□□□□ -0.6
CLCN1-203ENST00000455478 LRTM2Q8N967 370 aa11.33□□□□□ -0.6
CLCN1-203ENST00000455478 DPF1Q92782 380 aa11.33□□□□□ -0.6
CLCN1-203ENST00000455478 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
CLCN1-203ENST00000455478 SHPKQ9UHJ6 478 aa11.33□□□□□ -0.6
CLCN1-203ENST00000455478 MEGF8Q7Z7M0 2845 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 ANKRD34BA5PLL1 514 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 LINC01619G3V211 115 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 G3V4G9 280 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 TCRBP04435 133 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 IGLL1P15814 213 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 ANXA7P20073 488 aaKnown RBP11.32□□□□□ -0.6
CLCN1-203ENST00000455478 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
CLCN1-203ENST00000455478 RAB25P57735 213 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 SPINK9Q5DT21 86 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 SAMD5Q5TGI4 173 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
CLCN1-203ENST00000455478 F11RQ9Y624 299 aaKnown RBP11.32□□□□□ -0.6
CLCN1-203ENST00000455478 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
CLCN1-203ENST00000455478 IFNA17P01571 189 aa11.31□□□□□ -0.6
CLCN1-203ENST00000455478 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
CLCN1-203ENST00000455478 OR4E1P0C645 316 aa11.31□□□□□ -0.6
CLCN1-203ENST00000455478 SLURP1P55000 103 aa11.31□□□□□ -0.6
CLCN1-203ENST00000455478 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
CLCN1-203ENST00000455478 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
CLCN1-203ENST00000455478 RANGRFQ9HD47 186 aaPredicted RBP11.31□□□□□ -0.6
CLCN1-203ENST00000455478 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
CLCN1-203ENST00000455478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
CLCN1-203ENST00000455478 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 SULT1A3P0DMM9 295 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 SULT1A4P0DMN0 295 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 SPCS3P61009 180 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 DHRS2Q13268 280 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
CLCN1-203ENST00000455478 SLC25A24Q6NUK1 477 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 MZT2BQ6NZ67 158 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 LYG2Q86SG7 212 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 OR1P1Q8NH06 330 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 OR52E5Q8NH55 327 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 DCUN1D4Q92564 292 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
CLCN1-203ENST00000455478 C20orf85Q9H1P6 137 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 PLEKHA3Q9HB20 300 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 S4R3C0 116 aa11.3□□□□□ -0.6
CLCN1-203ENST00000455478 TRAV6A0A075B6T7 132 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 MFSD2BA6NFX1 497 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 IGHV3-23P01764 117 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 HLA-AP01891 365 aaKnown RBP11.29□□□□□ -0.6
CLCN1-203ENST00000455478 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
CLCN1-203ENST00000455478 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
CLCN1-203ENST00000455478 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
CLCN1-203ENST00000455478 A0A1B0GU03 582 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 BMPR1BO00238 502 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 CYB5BO43169 146 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 PITX3O75364 302 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
CLCN1-203ENST00000455478 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
CLCN1-203ENST00000455478 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 NUDT15Q9NV35 164 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 THYN1Q9P016 225 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 TMED3Q9Y3Q3 217 aa11.28□□□□□ -0.6
CLCN1-203ENST00000455478 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 K7EIM0 57 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 OVOL1O14753 267 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 HOXB5P09067 269 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 H2AFB2P0C5Z0 115 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 RNASE2P10153 161 aaKnown RBP11.27□□□□□ -0.61
CLCN1-203ENST00000455478 SLC25A6P12236 298 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 ZP3P21754 424 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 KPRPQ5T749 579 aaPredicted RBP11.27□□□□□ -0.61
CLCN1-203ENST00000455478 GGNBP1Q5YKI7 109 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 OR52B4Q8NGK2 314 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 ZNF502Q8TBZ5 544 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 MCRIP2Q9BUT9 160 aaKnown RBP11.27□□□□□ -0.61
CLCN1-203ENST00000455478 HSPB7Q9UBY9 170 aa11.27□□□□□ -0.61
CLCN1-203ENST00000455478 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
CLCN1-203ENST00000455478 ADAP1O75689 374 aa11.26□□□□□ -0.61
CLCN1-203ENST00000455478 NXPH3O95157 252 aa11.26□□□□□ -0.61
CLCN1-203ENST00000455478 CLEC3BP05452 202 aa11.26□□□□□ -0.61
CLCN1-203ENST00000455478 SNCAP37840 140 aa11.26□□□□□ -0.61
CLCN1-203ENST00000455478 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
CLCN1-203ENST00000455478 TNFRSF9Q07011 255 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms