RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 HEYLQ9NQ87 328 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 LINC00527Q9UJ94 153 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 WSB1Q9Y6I7 421 aa13.03□□□□□ -0.32
CCDC90B-202ENST00000455220 RLN2P04090 185 aa13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 LYL1P12980 280 aa13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 PPIFP30405 207 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 PRSS54Q6PEW0 395 aa13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 FAM110DQ8TAY7 271 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 NEURL2Q9BR09 285 aa13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 OR5AC2Q9NZP5 309 aa13.02□□□□□ -0.33
CCDC90B-202ENST00000455220 FBXO24O75426 580 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 REG1AP05451 166 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 PVALBP20472 110 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 HTR2BP41595 481 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 P2RX4Q99571 388 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 U3KQ87 197 aa13.01□□□□□ -0.33
CCDC90B-202ENST00000455220 E5RGE8 158 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 TSC22D2O75157 780 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
CCDC90B-202ENST00000455220 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
CCDC90B-202ENST00000455220 PVRIGQ6DKI7 326 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 SLC24A4Q8NFF2 622 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 LINC01006Q8NI28 216 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 TMEM170AQ8WVE7 144 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 GON7Q9BXV9 100 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 PSENENQ9NZ42 101 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 MBD2Q9UBB5 411 aa13□□□□□ -0.33
CCDC90B-202ENST00000455220 F11RQ9Y624 299 aaKnown RBP13□□□□□ -0.33
CCDC90B-202ENST00000455220 L7N2F9 121 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 SOX15O60248 233 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 BRI3O95415 125 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 HKR1P10072 659 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 SLC25A4P12235 298 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 SNCAP37840 140 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 VAMP2P63027 116 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 C2orf83Q53S99 150 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 OR5T1Q8NG75 326 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 OR1P1Q8NH06 330 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 OR4F5Q8NH21 305 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 THAP6Q8TBB0 222 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 ATRQ13535 2644 aa12.99□□□□□ -0.33
CCDC90B-202ENST00000455220 C15orf62A8K5M9 175 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 H3BP45 60 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 SMLR1H3BR10 107 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 NPY1RP25929 384 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 P2RY1P47900 373 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 CD300CQ08708 224 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 TMEM14EPQ6UXP3 125 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 OR4C12Q96R67 309 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 H3BUA1 57 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 IFNA10P01566 189 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 IGHG4P01861 327 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 SUB1P53999 127 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 MFAP2P55001 183 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 SPANXN5Q5MJ07 72 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 OR1L6Q8NGR2 347 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 FANCD2OSQ96PS1 177 aa12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 STRAPQ9Y3F4 350 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-202ENST00000455220 IGLV11-55A0A075B6I3 123 aa12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 TRBV9A0A0B4J1U6 114 aa12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 PSMB11A5LHX3 300 aa12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 SLC35B1P78383 322 aa12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-202ENST00000455220 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 CLPSL1A2RUU4 121 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 FAM24AA6NFZ4 105 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 DEFA4P12838 97 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 CAV2P51636 162 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 TMEM65Q6PI78 240 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 ZNF329Q86UD4 541 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
CCDC90B-202ENST00000455220 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 IGSF23A1L1A6 192 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 C1QBP02746 253 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 PRH1P02810 166 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 HIST1H1BP16401 226 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 PSMB8P28062 276 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 RAB11AP62491 216 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 OR11H4Q8NGC9 324 aa12.95□□□□□ -0.34
CCDC90B-202ENST00000455220 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 PRSS46E5RG02 174 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 CORTO00230 105 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms