RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BOLA2-SMG1P6H3BVE0 249 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 SSSCA1O60232 199 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 FBXO24O75426 580 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 CCNKO75909 580 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 SCGB1D2O95969 90 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 IGHG4P01861 327 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 RLN2P04090 185 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 OR13C7P0DN81 318 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 RNASE2P10153 161 aaKnown RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 SLC25A4P12235 298 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 PVALBP20472 110 aaPredicted RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 RPP30P78346 268 aaKnown RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 CD83Q01151 205 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 C2orf83Q53S99 150 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 UNQ5815/PRO19632Q6UWF5 114 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 NOXA1Q86UR1 476 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 COMMD1Q8N668 190 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 RNF152Q8N8N0 203 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 SLC24A4Q8NFF2 622 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 OR2T35Q8NGX2 323 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 LINC01006Q8NI28 216 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 HINT2Q9BX68 163 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 MAGT1Q9H0U3 335 aa8.82□□□□□ -1
TRAF4-206ENST00000454852 RANGRFQ9HD47 186 aaPredicted RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 HEYLQ9NQ87 328 aaPredicted RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 LYRM2Q9NU23 88 aaPredicted RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 F11RQ9Y624 299 aaKnown RBP8.82□□□□□ -1
TRAF4-206ENST00000454852 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 SOX15O60248 233 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
TRAF4-206ENST00000454852 NXPH3O95157 252 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 HIST1H1BP16401 226 aaKnown RBP8.81□□□□□ -1
TRAF4-206ENST00000454852 P2RY1P47900 373 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 SUB1P53999 127 aaKnown RBP eCLIP8.81□□□□□ -1
TRAF4-206ENST00000454852 S100A10P60903 97 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 RPL23AP62750 156 aaKnown RBP8.81□□□□□ -1
TRAF4-206ENST00000454852 CD300CQ08708 224 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 ECSCRQ19T08 205 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 SPINK9Q5DT21 86 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 C11orf87Q6NUJ2 197 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 TMEM65Q6PI78 240 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 TMEM14EPQ6UXP3 125 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 PRIMA1Q86XR5 153 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 LURAP1LQ8IV03 231 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 TMEM170AQ8WVE7 144 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 NOL4LQ96MY1 436 aaPredicted RBP8.81□□□□□ -1
TRAF4-206ENST00000454852 P2RX4Q99571 388 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 LSM5Q9Y4Y9 91 aaKnown RBP8.81□□□□□ -1
TRAF4-206ENST00000454852 NF1P21359 2839 aa8.81□□□□□ -1
TRAF4-206ENST00000454852 C15orf62A8K5M9 175 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 CORTO00230 105 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 CYB5BO43169 146 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 ELANEP08246 267 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 NPY1RP25929 384 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 PSMB8P28062 276 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 SNCAP37840 140 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 PROK1P58294 105 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 SLC35B1P78383 322 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 LRRC37A5PQ49AS3 106 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 Q5BKY6 102 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 THAP6Q8TBB0 222 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 MYOZ3Q8TDC0 251 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 RNASEH2CQ8TDP1 164 aaKnown RBP8.8□□□□□ -1
TRAF4-206ENST00000454852 FANCD2OSQ96PS1 177 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 SLA2Q9H6Q3 261 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 PSENENQ9NZ42 101 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 OR5AC2Q9NZP5 309 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 MBD2Q9UBB5 411 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 DMRT1Q9Y5R6 373 aa8.8□□□□□ -1
TRAF4-206ENST00000454852 PSMB11A5LHX3 300 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 PMS2P5A8MQ11 134 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 HMSDA8MTL9 139 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 PRSS46E5RG02 174 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 L7N2F9 121 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 IAPPP10997 89 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 MFAP2P55001 183 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 VAMP2P63027 116 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 FOXL1Q12952 345 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 FOXE3Q13461 319 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 ARSJQ5FYB0 599 aaPredicted RBP8.79□□□□□ -1
TRAF4-206ENST00000454852 TEX38Q6PEX7 206 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 TMEM252Q8N6L7 170 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.79□□□□□ -1
TRAF4-206ENST00000454852 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 OR4C12Q96R67 309 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 ATP6V0BQ99437 205 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 THYN1Q9P016 225 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 LINC00527Q9UJ94 153 aa8.79□□□□□ -1
TRAF4-206ENST00000454852 STRAPQ9Y3F4 350 aaKnown RBP8.79□□□□□ -1
TRAF4-206ENST00000454852 JMJD1CQ15652 2540 aa8.78□□□□□ -1
TRAF4-206ENST00000454852 FAM223BA6NKX1 122 aa8.78□□□□□ -1
TRAF4-206ENST00000454852 IFNA10P01566 189 aa8.78□□□□□ -1
TRAF4-206ENST00000454852 C1QBP02746 253 aa8.78□□□□□ -1
TRAF4-206ENST00000454852 REG1AP05451 166 aa8.78□□□□□ -1
TRAF4-206ENST00000454852 APELAP0DMC3 54 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms