RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PRRT1Q99946 306 aa18.9■□□□□ 0.62
MSH2-203ENST00000454849 GPR132Q9UNW8 380 aa18.9■□□□□ 0.62
MSH2-203ENST00000454849 TRBV7-1A0A0A6YYK4 115 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 A0A0G2JRQ6 117 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 HSD17B13Q7Z5P4 300 aaPredicted RBP18.89■□□□□ 0.61
MSH2-203ENST00000454849 NAA60Q9H7X0 242 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 PRR13Q9NZ81 148 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 PEMTQ9UBM1 199 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 COL7A1Q02388 2944 aa18.89■□□□□ 0.61
MSH2-203ENST00000454849 P0C879 139 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 UCP1P25874 307 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 HSPE1P61604 102 aaKnown RBP18.88■□□□□ 0.61
MSH2-203ENST00000454849 DCTN2Q13561 401 aaKnown RBP18.88■□□□□ 0.61
MSH2-203ENST00000454849 ZNF79Q15937 498 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 Q8N402 240 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 RNASE11Q8TAA1 199 aaKnown RBP18.88■□□□□ 0.61
MSH2-203ENST00000454849 LHFPL5Q8TAF8 219 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 CACNG8Q8WXS5 425 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 THYN1Q9P016 225 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 SMAD5-AS1Q9Y6J3 95 aa18.88■□□□□ 0.61
MSH2-203ENST00000454849 OR2T8A6NH00 312 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 IGHV3-48P01763 117 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 PRCDQ00LT1 54 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 CCDC190Q86UF4 302 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 GLYATL2Q8WU03 294 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 MISP3Q96FF7 219 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 TMEM222Q9H0R3 208 aa18.87■□□□□ 0.61
MSH2-203ENST00000454849 C2orf70A6NJV1 201 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 CYB5BO43169 146 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 ST8SIA3O43173 380 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 ETV6P41212 452 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 KLF9Q13886 244 aaPredicted RBP18.86■□□□□ 0.61
MSH2-203ENST00000454849 SURF2Q15527 256 aaPredicted RBP18.86■□□□□ 0.61
MSH2-203ENST00000454849 FAM209BQ5JX69 171 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 Q6ZRM9 215 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 GPHB5Q86YW7 130 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 OR2C3Q8N628 320 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 UBAC2Q8NBM4 344 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 SCARB1Q8WTV0 552 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 TRIM63Q969Q1 353 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 RRNAD1Q96FB5 475 aaKnown RBP18.86■□□□□ 0.61
MSH2-203ENST00000454849 SCP2D1Q9UJQ7 156 aa18.86■□□□□ 0.61
MSH2-203ENST00000454849 CRYM-AS1A6NIL9 109 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 K7EIM0 57 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 ZNF701M0R085 212 aaPredicted RBP18.85■□□□□ 0.61
MSH2-203ENST00000454849 IFNA17P01571 189 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 FOLR2P14207 255 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 FAM106AQ4KMX7 169 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 PLET1Q6UQ28 207 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 UNQ9165/PRO28630Q6UXU0 137 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 SELENOHQ8IZQ5 122 aaKnown RBP18.85■□□□□ 0.61
MSH2-203ENST00000454849 VN1R17PQ8TDU5 208 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 TMEM230Q96A57 120 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 PLEKHA3Q9HB20 300 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 SLC2A8Q9NY64 477 aa18.85■□□□□ 0.61
MSH2-203ENST00000454849 ATG12O94817 140 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 CDS2O95674 445 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 AKR1C4P17516 323 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 CD300EQ496F6 205 aaPredicted RBP18.84■□□□□ 0.61
MSH2-203ENST00000454849 TM4SF20Q53R12 229 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 Q8N1Y9 231 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 TOMM5Q8N4H5 51 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 DYNLRB2Q8TF09 96 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 C21orf62Q9NYP8 219 aa18.84■□□□□ 0.61
MSH2-203ENST00000454849 IGHV3OR16-8A0A075B7F1 116 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 TMEM268Q5VZI3 342 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 SLC35G3Q8N808 338 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 OR1P1Q8NH06 330 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 CHRDL1Q9BU40 450 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 SIGLEC8Q9NYZ4 499 aa18.83■□□□□ 0.6
MSH2-203ENST00000454849 LGALS9O00182 355 aa18.82■□□□□ 0.6
MSH2-203ENST00000454849 TGOLN2O43493 480 aa18.82■□□□□ 0.6
MSH2-203ENST00000454849 Q56UQ5 140 aa18.82■□□□□ 0.6
MSH2-203ENST00000454849 PINX1Q96BK5 328 aaKnown RBP18.82■□□□□ 0.6
MSH2-203ENST00000454849 GPR146Q96CH1 333 aa18.82■□□□□ 0.6
MSH2-203ENST00000454849 DNAH9Q9NYC9 4486 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 TMEM213A2RRL7 107 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 F8W735 103 aaPredicted RBP18.81■□□□□ 0.6
MSH2-203ENST00000454849 FRMD6-AS1P0C7T7 363 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 CBLN1P23435 193 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 ERHP84090 104 aaKnown RBP18.81■□□□□ 0.6
MSH2-203ENST00000454849 DHODHQ02127 395 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 DEFB114Q30KQ6 69 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 SPANXN2Q5MJ10 180 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 LCN12Q6JVE5 192 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 SGPP2Q8IWX5 399 aa18.81■□□□□ 0.6
MSH2-203ENST00000454849 RBPMSQ93062 196 aaKnown RBP18.81■□□□□ 0.6
MSH2-203ENST00000454849 B3GALNT1O75752 331 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 NXPH3O95157 252 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 HOXA1P49639 335 aaPredicted RBP18.8■□□□□ 0.6
MSH2-203ENST00000454849 ZNF57Q68EA5 555 aaPredicted RBP18.8■□□□□ 0.6
MSH2-203ENST00000454849 TMED4Q7Z7H5 227 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 SBSPONQ8IVN8 264 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 UXS1Q8NBZ7 420 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 PDCD10Q9BUL8 212 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 CACNG5Q9UF02 275 aa18.8■□□□□ 0.6
MSH2-203ENST00000454849 I3L2K1 104 aa18.79■□□□□ 0.6
MSH2-203ENST00000454849 MT-CO2P00403 227 aa18.79■□□□□ 0.6
MSH2-203ENST00000454849 FAUP35544 74 aaKnown RBP18.79■□□□□ 0.6
MSH2-203ENST00000454849 AP3S2P59780 193 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms