RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PVALBP20472 110 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-205ENST00000454569 RPL27AP46776 148 aaKnown RBP8.66□□□□□ -1.02
SCN9A-205ENST00000454569 SPCS3P61009 180 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 PDLIM3Q53GG5 364 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-205ENST00000454569 KCNRGQ8N5I3 272 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 TEX29Q8N6K0 151 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 OR8H1Q8NGG4 311 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 OR52E5Q8NH55 327 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 SRSF12Q8WXF0 261 aaKnown RBP8.66□□□□□ -1.02
SCN9A-205ENST00000454569 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 RASL11BQ9BPW5 248 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 COMMD5Q9GZQ3 224 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 ZC4H2Q9NQZ6 224 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 C1RLQ9NZP8 487 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 ZNF257Q9Y2Q1 563 aa8.66□□□□□ -1.02
SCN9A-205ENST00000454569 SETD2Q9BYW2 2564 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-205ENST00000454569 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 FAM90A26D6RGX4 464 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 ATP6V0E1O15342 81 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 FGF16O43320 207 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 BCL2L11O43521 198 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 GPR137BO60478 399 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 CRLF1O75462 422 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 CNIH1O95406 144 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 VAMP2P63027 116 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 C9orf152Q5JTZ5 239 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 OR1L8Q8NGR8 309 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 OR5R1Q8NH85 324 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 DTD1Q8TEA8 209 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 OR4C12Q96R67 309 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 PITPNC1Q9UKF7 332 aa8.65□□□□□ -1.02
SCN9A-205ENST00000454569 IGSF23A1L1A6 192 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 G3V318 75 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 RPL12P30050 165 aaKnown RBP8.65□□□□□ -1.03
SCN9A-205ENST00000454569 P2RY1P47900 373 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 MFAP2P55001 183 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 ARL16Q0P5N6 197 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 OR5B3Q8NH48 314 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 NOL4LQ96MY1 436 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-205ENST00000454569 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.03
SCN9A-205ENST00000454569 DMRT1Q9Y5R6 373 aa8.65□□□□□ -1.03
SCN9A-205ENST00000454569 JMJD1CQ15652 2540 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 FGF2P09038 288 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 HKR1P10072 659 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 MAS1LP35410 378 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 NHLH2Q02577 135 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
SCN9A-205ENST00000454569 MLANAQ16655 118 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 TEX261Q6UWH6 196 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF767PQ75MW2 155 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 LFNGQ8NES3 379 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 ARPC1AQ92747 370 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 SMIM8Q96KF7 97 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
SCN9A-205ENST00000454569 PARP11Q9NR21 331 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 FKBP11Q9NYL4 201 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 PSENENQ9NZ42 101 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
SCN9A-205ENST00000454569 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 U3KQ87 197 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 C2CD3Q4AC94 2353 aa8.64□□□□□ -1.03
SCN9A-205ENST00000454569 BTBD17A6NE02 478 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 PMS2P5A8MQ11 134 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 ACTL6BO94805 426 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 IGHG2P01859 326 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 PRH1P02810 166 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 FAM157CP0CG43 387 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 OR13C7P0DN81 318 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
SCN9A-205ENST00000454569 HOXA1P49639 335 aaPredicted RBP8.63□□□□□ -1.03
SCN9A-205ENST00000454569 HILS1P60008 231 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 SPANXN5Q5MJ07 72 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 C10orf99Q6UWK7 81 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 C16orf82Q7Z2V1 217 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 MRPL41Q8IXM3 137 aaKnown RBP8.63□□□□□ -1.03
SCN9A-205ENST00000454569 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 RAB40CQ96S21 281 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF471Q9BX82 626 aaPredicted RBP8.63□□□□□ -1.03
SCN9A-205ENST00000454569 ZNF702PQ9H963 129 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 PLEKHA3Q9HB20 300 aa8.63□□□□□ -1.03
SCN9A-205ENST00000454569 SOX15O60248 233 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 MED6O75586 246 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 IFNA7P01567 189 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 CAV2P51636 162 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
SCN9A-205ENST00000454569 UBA52P62987 128 aaKnown RBP8.62□□□□□ -1.03
SCN9A-205ENST00000454569 DEFA5Q01523 94 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 BSXQ3C1V8 233 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 C19orf54Q5BKX5 351 aa8.62□□□□□ -1.03
SCN9A-205ENST00000454569 RBMS3Q6XE24 437 aaKnown RBP8.62□□□□□ -1.03
SCN9A-205ENST00000454569 TMEM86BQ8N661 226 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms