RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
HDAC4-205ENST00000454542 NAP1L6A6NFF2 107 aa10.85□□□□□ -0.67
HDAC4-205ENST00000454542 MFSD2BA6NFX1 497 aa10.85□□□□□ -0.67
HDAC4-205ENST00000454542 KLF5Q13887 457 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-205ENST00000454542 RBMS2Q15434 407 aaKnown RBP10.85□□□□□ -0.67
HDAC4-205ENST00000454542 ZNF57Q68EA5 555 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-205ENST00000454542 OR2C3Q8N628 320 aa10.85□□□□□ -0.67
HDAC4-205ENST00000454542 C7orf50Q9BRJ6 194 aaKnown RBP10.85□□□□□ -0.67
HDAC4-205ENST00000454542 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 PRB2P02812 416 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-205ENST00000454542 DEFA4P12838 97 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 Q6ZRM9 215 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 OR1P1Q8NH06 330 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 ZNF502Q8TBZ5 544 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 RRNAD1Q96FB5 475 aaKnown RBP10.84□□□□□ -0.67
HDAC4-205ENST00000454542 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 PTTG2Q9NZH5 202 aa10.84□□□□□ -0.67
HDAC4-205ENST00000454542 NDUFB6O95139 128 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 SRPXP78539 464 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 TMEM128Q5BJH2 165 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 NMSQ5H8A3 153 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 TMEM268Q5VZI3 342 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 SLC35G3Q8N808 338 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 OR52E5Q8NH55 327 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 VN1R17PQ8TDU5 208 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 EEF1AKMT3Q96AZ1 226 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 CCDC32Q9BV29 185 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 PLEKHA3Q9HB20 300 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 THYN1Q9P016 225 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 KCNIP3Q9Y2W7 256 aa10.83□□□□□ -0.68
HDAC4-205ENST00000454542 TRBV7-1A0A0A6YYK4 115 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 F8W735 103 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-205ENST00000454542 K7EIL1 84 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 K7EIM0 57 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 CYB5BO43169 146 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 AKR1C4P17516 323 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 CCR6P51684 374 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 UBE2MP61081 183 aaKnown RBP10.82□□□□□ -0.68
HDAC4-205ENST00000454542 RPEL1Q2QD12 228 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 IL34Q6ZMJ4 242 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 OR9G4Q8NGQ1 327 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 SIGLEC8Q9NYZ4 499 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 ZMAT5Q9UDW3 170 aaKnown RBP10.82□□□□□ -0.68
HDAC4-205ENST00000454542 SHPKQ9UHJ6 478 aa10.82□□□□□ -0.68
HDAC4-205ENST00000454542 DUXBA0A1W2PPF3 345 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 PPP5D1E7EU14 171 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 GGCTO75223 188 aaKnown RBP10.81□□□□□ -0.68
HDAC4-205ENST00000454542 ANXA3P12429 323 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 INPP1P49441 399 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 MECP2P51608 486 aaKnown RBP10.81□□□□□ -0.68
HDAC4-205ENST00000454542 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 PPP1R1AQ13522 171 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 TMED4Q7Z7H5 227 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 RNASE11Q8TAA1 199 aaKnown RBP10.81□□□□□ -0.68
HDAC4-205ENST00000454542 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 S4R3C0 116 aa10.81□□□□□ -0.68
HDAC4-205ENST00000454542 WI2-2373I1.2A0A1W2PRP0 233 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 A8MWP6 167 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 I3L2K1 104 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 LGALS9O00182 355 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 PLA2G10O15496 165 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 SAP30O75446 220 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 IGLV1-51P01701 117 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 IGHV3-23P01764 117 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
HDAC4-205ENST00000454542 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-205ENST00000454542 SPCS3P61009 180 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 SPINK9Q5DT21 86 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 SLC25A24Q6NUK1 477 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 CLEC19AQ6UXS0 136 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 LGI3Q8N145 548 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 S100ZQ8WXG8 99 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 ELOVL1Q9BW60 279 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-205ENST00000454542 DNAH9Q9NYC9 4486 aa10.8□□□□□ -0.68
HDAC4-205ENST00000454542 PIGBOS1A0A0B4J2F0 54 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 SFT2D2O95562 160 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 CSN3P07498 182 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 SULT1A3P0DMM9 295 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 SULT1A4P0DMN0 295 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 RNASE2P10153 161 aaKnown RBP10.79□□□□□ -0.68
HDAC4-205ENST00000454542 GPR183P32249 361 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 ARL3P36405 182 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 ERHP84090 104 aaKnown RBP10.79□□□□□ -0.68
HDAC4-205ENST00000454542 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 SCARB1Q8WTV0 552 aa10.79□□□□□ -0.68
HDAC4-205ENST00000454542 ZNF414Q96IQ9 312 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms