RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 HIPK2Q9H2X6 1198 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 KLK11Q9UBX7 282 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 OR2T8A6NH00 312 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 FAM25AB3EWG3 89 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 FAM25CB3EWG5 89 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 FAM25GB3EWG6 89 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 K7EIM0 57 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-208ENST00000452047 RNASE12Q5GAN4 147 aaKnown RBP9.35□□□□□ -0.91
CPSF4-208ENST00000452047 GPR107Q5VW38 600 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 OR52I2Q8NH67 350 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 SCARB1Q8WTV0 552 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-208ENST00000452047 TMEM56Q96MV1 263 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 ABHD1Q96SE0 405 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 RETNQ9HD89 108 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 PALMDQ9NP74 551 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 FKBP11Q9NYL4 201 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 EXTL2Q9UBQ6 330 aa9.35□□□□□ -0.91
CPSF4-208ENST00000452047 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 SCAF4O95104 1147 aaKnown RBP9.34□□□□□ -0.91
CPSF4-208ENST00000452047 CD3DP04234 171 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 ADMP35318 185 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 RND3P61587 244 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 RNASE10Q5GAN6 216 aaKnown RBP9.34□□□□□ -0.91
CPSF4-208ENST00000452047 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 SLC16A13Q7RTY0 426 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 ARRDC1Q8N5I2 433 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 OR1P1Q8NH06 330 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 MRGPRFQ96AM1 343 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF414Q96IQ9 312 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 CHRDL1Q9BU40 450 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 C21orf62Q9NYP8 219 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
CPSF4-208ENST00000452047 MTFP1Q9UDX5 166 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 UFC1Q9Y3C8 167 aa9.34□□□□□ -0.91
CPSF4-208ENST00000452047 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 IFNA6P05013 189 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 PI3P19957 117 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 TBPP20226 339 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 H2BFWTQ7Z2G1 175 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 OR2C3Q8N628 320 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 ZNF114Q8NC26 417 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 OR4D10Q8NGI6 311 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 OR1L6Q8NGR2 347 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 ZNF486Q96H40 463 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-208ENST00000452047 MIXL1Q9H2W2 232 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
CPSF4-208ENST00000452047 RSL24D1Q9UHA3 163 aaKnown RBP9.33□□□□□ -0.92
CPSF4-208ENST00000452047 RYR2Q92736 4967 aa9.33□□□□□ -0.92
CPSF4-208ENST00000452047 I3L2K1 104 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 NDUFA4O00483 81 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 CD74P04233 296 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 P0C879 139 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 PGAM2P15259 253 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 PIGPP57054 158 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 ZFAND6Q6FIF0 208 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 OR4A16Q8NH70 328 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 FAM110AQ9BQ89 295 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
CPSF4-208ENST00000452047 CCDC160A6NGH7 325 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 CTSGP08311 255 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-208ENST00000452047 PPP5CP53041 499 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 HSPE1P61604 102 aaKnown RBP9.31□□□□□ -0.92
CPSF4-208ENST00000452047 SPCS2Q15005 226 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 Q56UQ5 140 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 RBPMS2Q6ZRY4 209 aaKnown RBP9.31□□□□□ -0.92
CPSF4-208ENST00000452047 GPR141Q7Z602 305 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 UBAC2Q8NBM4 344 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 C15orf40Q8WUR7 153 aa9.31□□□□□ -0.92
CPSF4-208ENST00000452047 SPAG8Q99932 426 aaPredicted RBP9.31□□□□□ -0.92
CPSF4-208ENST00000452047 IGHV3OR16-8A0A075B7F1 116 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 C15orf62A8K5M9 175 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 GABARAPH6UMI1 98 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 K7EMT4 169 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 CTDSP2O14595 271 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 TSPAN4O14817 238 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 TAS2R19P59542 299 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 OR13C8Q8NGS7 320 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 TERB2Q8NHR7 220 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 MISP3Q96FF7 219 aa9.3□□□□□ -0.92
CPSF4-208ENST00000452047 GAR1Q9NY12 217 aaKnown RBP9.3□□□□□ -0.92
CPSF4-208ENST00000452047 A0A0B4J293 547 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 LCE6AA0A183 80 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 C3orf85A0A1B0GTC6 90 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 INS-IGF2F8WCM5 200 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 RGS5O15539 181 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
CPSF4-208ENST00000452047 RAB3DO95716 219 aa9.29□□□□□ -0.92
CPSF4-208ENST00000452047 MT-CO2P00403 227 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms