RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	IGHV3-23	P01764	117 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	CD74	P04233	296 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	GPR183	P32249	361 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	TMBIM6	P55061	237 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	HSPE1	P61604	102 aa	Known RBP	12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	ERH	P84090	104 aa	Known RBP	12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	MEF2D	Q14814	521 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	CCDC71L	Q8N9Z2	235 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	OR52I2	Q8NH67	350 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	ABHD1	Q96SE0	405 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	NAA50	Q9GZZ1	169 aa	Known RBP	12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	C5orf66	Q9H5L9	145 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	C21orf62	Q9NYP8	219 aa		12.08	□□□□□ -0.48
SGCE-208	ENST00000450385	OR11H12	B2RN74	326 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	CTDSPL	O15194	276 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	CD3D	P04234	171 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	PRCD	Q00LT1	54 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	GUCA2B	Q16661	112 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	LAMTOR1	Q6IAA8	161 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	OR2C3	Q8N628	320 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	SCARB1	Q8WTV0	552 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	ISOC1	Q96CN7	298 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	HINT2	Q9BX68	163 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	DAZ1	Q9NQZ3	744 aa	Known RBP	12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	CACFD1	Q9UGQ2	172 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385	CEPT1	Q9Y6K0	416 aa		12.07	□□□□□ -0.48
SGCE-208	ENST00000450385		M0QYG6	137 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	LYL1	P12980	280 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	PGAM2	P15259	253 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	PIGP	P57054	158 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	REL	Q04864	619 aa	Predicted RBP	12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	SURF2	Q15527	256 aa	Predicted RBP	12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	IL17D	Q8TAD2	202 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	TMEM190	Q8WZ59	177 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	FAM110A	Q9BQ89	295 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	COPZ2	Q9P299	210 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	NSG2	Q9Y328	171 aa		12.06	□□□□□ -0.48
SGCE-208	ENST00000450385	OR2T8	A6NH00	312 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	C15orf62	A8K5M9	175 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385		K7EIM0	57 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	RGS5	O15539	181 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	RAB3D	O95716	219 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	IGKV1-39	P01597	117 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	IGKV1D-39	P04432	117 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	CD5	P06127	495 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	MFAP4	P55083	255 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	TM4SF20	Q53R12	229 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	CASC10	Q5T4H9	136 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	STEAP1B	Q6NZ63	245 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	FAM219A	Q8IW50	185 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	TMEM61	Q8N0U2	210 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	SPAG8	Q99932	426 aa	Predicted RBP	12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	CCDC59	Q9P031	241 aa	Known RBP	12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	MLX	Q9UH92	298 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385		S4R3C0	116 aa		12.05	□□□□□ -0.48
SGCE-208	ENST00000450385	C3orf85	A0A1B0GTC6	90 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	CORT	O00230	105 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	TSPAN4	O14817	238 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	NUPL2	O15504	423 aa	Known RBP	12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	CTSD	P07339	412 aa	Predicted RBP	12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	CD7	P09564	240 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	SUB1	P53999	127 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	MFAP2	P55001	183 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	UNQ9165/PRO28630	Q6UXU0	137 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	OR52B4	Q8NGK2	314 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	SMIM4	Q8WVI0	70 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	MRGPRF	Q96AM1	343 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	WDR89	Q96FK6	387 aa	Predicted RBP	12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	EDA2R	Q9HAV5	297 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	PLEKHA3	Q9HB20	300 aa		12.04	□□□□□ -0.48
SGCE-208	ENST00000450385	DBX1	A6NMT0	343 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	DISC1	C4P0D8	188 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	CTSG	P08311	255 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385		P0C879	139 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	UCP1	P25874	307 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	RPL5	P46777	297 aa	Known RBP	12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	CMC4	P56277	68 aa	Predicted RBP	12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	RRNAD1	Q96FB5	475 aa	Known RBP	12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	SCGB3A2	Q96PL1	93 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	PDCD10	Q9BUL8	212 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	MIXL1	Q9H2W2	232 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	HIPK2	Q9H2X6	1198 aa		12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	RSL24D1	Q9UHA3	163 aa	Known RBP	12.03	□□□□□ -0.48
SGCE-208	ENST00000450385	CSMD3	Q7Z407	3707 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	PIGBOS1	A0A0B4J2F0	54 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385		F8W735	103 aa	Predicted RBP	12.02	□□□□□ -0.49
SGCE-208	ENST00000450385		I3L2K1	104 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	SNCA	P37840	140 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	AKR1C2	P52895	323 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	DHODH	Q02127	395 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385		Q56UQ5	140 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	BTNL8	Q6UX41	500 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	DEFB125	Q8N687	156 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	DYNC2LI1	Q8TCX1	351 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	CACNG8	Q8WXS5	425 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	DIRAS2	Q96HU8	199 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	OR10C1	Q96KK4	312 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	TP53RK	Q96S44	253 aa		12.02	□□□□□ -0.49

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