RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HES7Q9BYE0 225 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 RPL24P83731 157 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 WDR31Q8NA23 367 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 MTCH1Q9NZJ7 389 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 CELA3AP09093 270 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 RSPO4Q2I0M5 234 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
SYNGAP1-204ENST00000449372 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 FGFRL1Q8N441 504 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 HES4Q9HCC6 221 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 C2orf70A6NJV1 201 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 CX3CL1P78423 397 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 ABHD17BQ5VST6 288 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 ZNF645Q8N7E2 425 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 PPP1R35Q8TAP8 253 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 PPOXP50336 477 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 HIST1H1AQ02539 215 aaPredicted RBP11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 TFF3Q07654 80 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM164Q5U3C3 297 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 MDS2Q8NDY4 140 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 POM121L2Q96KW2 1035 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 MED13Q9UHV7 2174 aa11.17□□□□□ -0.62
SYNGAP1-204ENST00000449372 K7EP34 96 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 APCSP02743 223 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 PRSS12P56730 875 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 HSD52Q0P140 79 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 PCSK4Q6UW60 755 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 TRAV38-1A0A0B4J264 116 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 HLA-DQA1P01909 254 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 CRYBB3P26998 211 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 TMEM249Q2WGJ8 235 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 TCL1AP56279 114 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 TRIP6Q15654 476 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 ENY2Q9NPA8 101 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 V9GYV3 84 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 H3BUT2 72 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 K7EQM0 130 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 CLDN14O95500 239 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 GPR183P32249 361 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR1C1Q15619 314 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 HSD17B10Q99714 261 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 TTTY12Q9BZ98 90 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 JKAMPQ9P055 326 aa11.16□□□□□ -0.62
SYNGAP1-204ENST00000449372 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 OOEPA6NGQ2 149 aa11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 LRRC30A6NM36 301 aa11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 SYNGR1O43759 233 aa11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 RAB1CQ92928 201 aa11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 NAA38Q9BRA0 125 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-204ENST00000449372 SPINT2O43291 252 aa11.15□□□□□ -0.63
SYNGAP1-204ENST00000449372 NGFP01138 241 aa11.15□□□□□ -0.63
SYNGAP1-204ENST00000449372 APOA2P02652 100 aa11.15□□□□□ -0.63
SYNGAP1-204ENST00000449372 AMY1AP04745 511 aa11.15□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF788Q6ZQV5 615 aa11.15□□□□□ -0.63
SYNGAP1-204ENST00000449372 PCNX2A6NKB5 2137 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 FRYQ5TBA9 3013 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 C9orf118A6NHY6 69 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 USF1P22415 310 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 ZNF318Q5VUA4 2279 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 A0A096LPE4 126 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 IGKV1-6A0A0C4DH72 117 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 RPL31P62899 125 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 SEC11AP67812 179 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 CXorf1O96002 111 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 CGAP01215 116 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 MAGEA5P43359 124 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 FABP6P51161 128 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 SRYQ05066 204 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR2Z1Q8NG97 314 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 OR4A16Q8NH70 328 aa11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 SSBP4Q9BWG4 385 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-204ENST00000449372 TRAV24A0A0B4J272 114 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms