RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SPATA46Q5T0L3 261 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 FA2HQ7L5A8 372 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 MKXQ8IYA7 352 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 GRAMD2BQ96HH9 432 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 KCNIP1Q9NZI2 227 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 LOC400499M0QZD8 3231 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 F2RL2O00254 374 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 FTH1P19P0C7X4 201 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 HIST1H1EP10412 219 aaKnown RBP15.89■□□□□ 0.13
HMGA1-205ENST00000447654 C2orf91Q6ZV80 131 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 ATP5L2Q7Z4Y8 100 aa15.89■□□□□ 0.13
HMGA1-205ENST00000447654 RHBDL1O75783 438 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 GOSR1O95249 250 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 CKS1BP61024 79 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 RSPO4Q2I0M5 234 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-205ENST00000447654 WDR31Q8NA23 367 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 MBD6Q96DN6 1003 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 RNASE7Q9H1E1 156 aaKnown RBP15.88■□□□□ 0.13
HMGA1-205ENST00000447654 SLC25A10Q9UBX3 287 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-205ENST00000447654 KNTC1P50748 2209 aa15.88■□□□□ 0.13
HMGA1-205ENST00000447654 C15orf62A8K5M9 175 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 C21orf140B9A014 251 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 CYC1P08574 325 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 PQLC2Q6ZP29 291 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 KIR3DL3Q8N743 410 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 ZNF645Q8N7E2 425 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 FAM222BQ8WU58 562 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 SH2D2AQ9NP31 389 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 TMEM167BQ9NRX6 74 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 ZFHX4Q86UP3 3567 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 A0A0G2JLM5 398 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 LEPROTL1O95214 131 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 CLDN14O95500 239 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 Q0VFX4 171 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 FAM231DQ6ZW35 169 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 DRAM1Q8N682 238 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 JMJD8Q96S16 334 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 SPATA25Q9BR10 227 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 KCNS2Q9ULS6 477 aa15.87■□□□□ 0.13
HMGA1-205ENST00000447654 IGHV3-15A0A0B4J1V0 119 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 ZIC3O60481 467 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 TCL1AP56279 114 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 SMAGPQ0VAQ4 97 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 C20orf204Q6ZNR8 217 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 TMEM251Q8N6I4 163 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 H1FXQ92522 213 aaKnown RBP15.86■□□□□ 0.13
HMGA1-205ENST00000447654 GGTLC1Q9BX51 225 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 MAP1LC3CQ9BXW4 147 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 GTSF1LQ9H1H1 148 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 IL36RNQ9UBH0 155 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 TP73-AS1Q9UF72 201 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 LIPFP07098 398 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 OR9G9P0C7N8 305 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 SLC35B1P78383 322 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 DOLPP1Q86YN1 238 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 FER1L6-AS2Q96M78 137 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 TRIB1Q96RU8 372 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 ARRDC1-AS1Q9H2J1 176 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 OR1A1Q9P1Q5 309 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 NCKAP5O14513 1909 aa15.86■□□□□ 0.13
HMGA1-205ENST00000447654 CRYBA4P53673 196 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 TREML4Q6UXN2 200 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 FOXI2Q6ZQN5 318 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 RPS19BP1Q86WX3 136 aaKnown RBP15.85■□□□□ 0.13
HMGA1-205ENST00000447654 UCN2Q96RP3 112 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 CLCF1Q9UBD9 225 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 DOCK10Q96BY6 2186 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 A0A1W2PPM0 123 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 GAGE12HA6NDE8 117 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 H3BUT2 72 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 LIFP15018 202 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 ACP1P24666 158 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 PPOXP50336 477 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 SSR4P51571 173 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 FXYD3Q14802 87 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 C5orf64Q2M2E5 130 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 ZNF841Q6ZN19 808 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 PPP1R32Q7Z5V6 425 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 OR4A5Q8NH83 315 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 SPCS1Q9Y6A9 102 aa15.85■□□□□ 0.13
HMGA1-205ENST00000447654 FOLR3P41439 243 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 CATR1Q13166 79 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 RTL8BQ17RB0 113 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 NHLRC2Q8NBF2 726 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 MRAP2Q96G30 205 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 URB1-AS1Q96HZ7 61 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 MGST2Q99735 147 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 HSPB8Q9UJY1 196 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 FRYQ5TBA9 3013 aa15.84■□□□□ 0.13
HMGA1-205ENST00000447654 SIVA1O15304 175 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 IGLV2-8P01709 118 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 RPL8P62917 257 aaKnown RBP15.83■□□□□ 0.13
HMGA1-205ENST00000447654 CT55Q8WUE5 264 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 ZDHHC16Q969W1 377 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 C5orf30Q96GV9 206 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 CFAP47Q6ZTR5 3102 aa15.83■□□□□ 0.13
HMGA1-205ENST00000447654 SPENQ96T58 3664 aaKnown RBP15.83■□□□□ 0.12
HMGA1-205ENST00000447654 TRAV26-1A0A087WT03 109 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 IGHV1-24A0A0C4DH33 117 aa15.83■□□□□ 0.12
HMGA1-205ENST00000447654 A0A1W2PNU3 283 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms