RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RITA1Q96K30 269 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 WDR83OSQ9Y284 106 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 RHEBQ15382 184 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 NECAP1Q8NC96 275 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 ELOVL1Q9BW60 279 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
LAPTM4B-201ENST00000445593 E7EUB6 86 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 APOA2P02652 100 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 REG1AP05451 166 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 CD81P60033 236 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 C15orf54Q8N8G6 183 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 CORO2AQ92828 525 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 SMIM7Q9BQ49 75 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 TRAV1-1A0A0B4J248 108 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 A0A1W2PRD5 423 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 A0A1W2PRF3 423 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 A0A1W2PRM7 423 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 B9A039 149 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 CBLN4Q9NTU7 201 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 TMEM14BQ9NUH8 114 aa13.68□□□□□ -0.22
LAPTM4B-201ENST00000445593 CFAP46Q8IYW2 2715 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 IFNA1P01562 189 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 IGFBP2P18065 325 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 UCNP55089 124 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 MEF2BQ02080 365 aaPredicted RBP13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 Q8N7P7 452 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 ADTRPQ96IZ2 230 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 C2orf88Q9BSF0 95 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 TMEM208Q9BTX3 173 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 TGIF2-C20orf24A0A0A6YYL0 155 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 RAB5AP20339 215 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 PSMB3P49720 205 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 ACOT6Q3I5F7 207 aaPredicted RBP13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 TIMM9Q9Y5J7 89 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 H0YJW9 148 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 CYB5BO43169 146 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 SLC25A17O43808 307 aa13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
LAPTM4B-201ENST00000445593 TEX50A0A1B0GTY4 177 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 KBTBD11O94819 623 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 GGTLC1Q9BX51 225 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 UPK2O00526 184 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 MT-ND4LP03901 98 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 ATP5G3P48201 142 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 PKIAP61925 76 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 MEF2CQ06413 473 aaPredicted RBP13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 FAM216AQ8WUB2 273 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 FOXA2Q9Y261 457 aaPredicted RBP13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 MYO18BQ8IUG5 2567 aa13.66□□□□□ -0.22
LAPTM4B-201ENST00000445593 CXCL1P09341 107 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 ACY3Q96HD9 319 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 NCOR1P1Q9H4R4 102 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 IGHV3-21A0A0B4J1V1 117 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 ITGB1BP1O14713 200 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 ZNF672Q499Z4 452 aaPredicted RBP13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 Q8WTZ3 238 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 SEPSECSQ9HD40 501 aaKnown RBP13.65□□□□□ -0.22
LAPTM4B-201ENST00000445593 CNTFRP26992 372 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 VWC2Q2TAL6 325 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR10A7Q8NGE5 316 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 OR52E5Q8NH55 327 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 ONECUT1Q9UBC0 465 aa13.65□□□□□ -0.23
LAPTM4B-201ENST00000445593 FLNCQ14315 2725 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 IGHV2-5P01817 119 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 IGHV1-8P0DP01 117 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 LGALS4P56470 323 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 SLC35E3Q7Z769 313 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 C1orf159Q96HA4 380 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 DOK5Q9P104 306 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 PRNDQ9UKY0 176 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 C11orf94C9JXX5 98 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 GNB1P62873 340 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 STPG3Q8N7X2 389 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
LAPTM4B-201ENST00000445593 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 RAB4BP61018 213 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 PARLQ9H300 379 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 NPVFQ9HCQ7 196 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 RPH3ALQ9UNE2 315 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 FOXH1O75593 365 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 UQCRFS1P47985 274 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
LAPTM4B-201ENST00000445593 SAPCD1Q5SSQ6 148 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms