RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 TDRD15B5MCY1 1934 aaKnown RBP6.65□□□□□ -1.34
RIF1-205ENST00000444746 CD8AP01732 235 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 TRBV20OR9-2A0A075B6H5 130 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 UBE2L6O14933 153 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 FAM90A1Q86YD7 464 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 TRAV40A0A0B4J280 105 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 IL18BPO95998 194 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 NBEAP1P0C6P0 100 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 EVI2AP22794 236 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 CRYGSP22914 178 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
RIF1-205ENST00000444746 PF4P02776 101 aa6.65□□□□□ -1.35
RIF1-205ENST00000444746 PKIAP61925 76 aa6.65□□□□□ -1.35
RIF1-205ENST00000444746 ZNF324BQ6AW86 544 aaPredicted RBP6.65□□□□□ -1.35
RIF1-205ENST00000444746 ARPC1AQ92747 370 aa6.65□□□□□ -1.35
RIF1-205ENST00000444746 DPM3Q9P2X0 92 aa6.65□□□□□ -1.35
RIF1-205ENST00000444746 LEPROTL1O95214 131 aa6.65□□□□□ -1.35
RIF1-205ENST00000444746 TRBV6-7A0A0A0MS04 114 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 COL8A2P25067 703 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 NDPQ00604 133 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 FAM106AQ4KMX7 169 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 GREB1LQ9C091 1923 aaPredicted RBP6.64□□□□□ -1.35
RIF1-205ENST00000444746 CACNA1CQ13936 2221 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 HLA-DRB1P01911 266 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 OR52E5Q8NH55 327 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 OR4D5Q8NGN0 318 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 CLDND2Q8NHS1 167 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 PNRC2Q9NPJ4 139 aaKnown RBP6.64□□□□□ -1.35
RIF1-205ENST00000444746 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 UCP1P25874 307 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 ZNF497Q6ZNH5 498 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 C20orf204Q6ZNR8 217 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 Q9H3A6 140 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 A0A0G2JNJ9 132 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 PRSS2P07478 247 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 SFTPCP11686 197 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 Q9UFV3 132 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 A0A0G2JRQ6 117 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 RPL15P61313 204 aaKnown RBP6.64□□□□□ -1.35
RIF1-205ENST00000444746 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
RIF1-205ENST00000444746 MCRIP2Q9BUT9 160 aaKnown RBP6.64□□□□□ -1.35
RIF1-205ENST00000444746 TBL2Q9Y4P3 447 aaKnown RBP6.64□□□□□ -1.35
RIF1-205ENST00000444746 ADMP35318 185 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 HERVK_113P61574 105 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 FOXD3Q9UJU5 478 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZNF256Q9Y2P7 627 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZFC3H1O60293 1989 aaKnown RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 CIDEAO60543 219 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 SMIM12Q96EX1 92 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZNF646O15015 1829 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 APOHP02749 345 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZNF329Q86UD4 541 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 UPK2O00526 184 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 SIAH2O43255 324 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 Q71RC1 249 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 C21orf62Q9NYP8 219 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 JKAMPQ9P055 326 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZFP30Q9Y2G7 519 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 NDUFA3O95167 84 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 CTAG1AP78358 180 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 TMEM200BQ69YZ2 307 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 DMRTC2Q8IXT2 367 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 WDR90Q96KV7 1748 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 IGHV3-64A0A075B6Q5 118 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 IGKV2-40A0A087WW87 121 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 ZNF503-AS2A6NEH8 195 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 PEX7O00628 323 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 IGKV2D-40P01614 121 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 GGACTQ9BVM4 153 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 NUP214P35658 2090 aaPredicted RBP6.63□□□□□ -1.35
RIF1-205ENST00000444746 THBDP07204 575 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 DPH3Q96FX2 82 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
RIF1-205ENST00000444746 WNK3Q9BYP7 1800 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 NDUFA2O43678 99 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 MPDU1O75352 247 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 RPL23P62829 140 aaKnown RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 CHRNA10Q9GZZ6 450 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 NYNRINQ9P2P1 1898 aaKnown RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 IFI6P09912 130 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 HOXB1P14653 301 aaPredicted RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 PSG9Q00887 426 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 FHL1Q13642 323 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 RUSC1-AS1Q66K80 236 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 B3GALT5-AS1P59052 145 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 SELENOTP62341 195 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 SUPT4H1P63272 117 aaKnown RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 ZNF672Q499Z4 452 aaPredicted RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 MAP1LC3AQ9H492 121 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 A0A0U1RRA0 63 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
RIF1-205ENST00000444746 MIA3Q5JRA6 1907 aa6.62□□□□□ -1.35
RIF1-205ENST00000444746 FAM90A26D6RGX4 464 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms