RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 PRCDQ00LT1 54 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 RBMS2Q15434 407 aaKnown RBP7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 SP6Q3SY56 376 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 OR10W1Q8NGF6 305 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 DLX4Q92988 240 aaPredicted RBP7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 C7orf50Q9BRJ6 194 aaKnown RBP7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 RTBDNQ9BSG5 229 aaPredicted RBP7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 ENY2Q9NPA8 101 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 PEMTQ9UBM1 199 aa7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 F11RQ9Y624 299 aaKnown RBP7.97□□□□□ -1.13
HLA-DQB1-206ENST00000443574 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 A0A1B0GW64 132 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 A6NJY4 79 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CGB1A6NKQ9 187 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 GGCTO75223 188 aaKnown RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CDS2O95674 445 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 IFNA17P01571 189 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 AKR1C4P17516 323 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 HOXA1P49639 335 aaPredicted RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 HSPE1P61604 102 aaKnown RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ERHP84090 104 aaKnown RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 WT1-ASQ06250 92 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMEM268Q5VZI3 342 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMED4Q7Z7H5 227 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 MRAPQ8TCY5 172 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 IL22RA2Q969J5 263 aa7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 AURKAIP1Q9NWT8 199 aaPredicted RBP7.96□□□□□ -1.14
HLA-DQB1-206ENST00000443574 IGKV1-5P01602 117 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 VAMP1P23763 118 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ARL3P36405 182 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SNCAP37840 140 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SUB1P53999 127 aaKnown RBP eCLIP7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 KLK9Q2XQG4 91 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMEM128Q5BJH2 165 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SLC25A24Q6NUK1 477 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ACSM6Q6P461 480 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 C19orf35Q6ZS72 473 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 LGI3Q8N145 548 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CENPSQ8N2Z9 138 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 OR1P1Q8NH06 330 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 VN1R17PQ8TDU5 208 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 GLYATL2Q8WU03 294 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 S100ZQ8WXG8 99 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 GAR1Q9NY12 217 aaKnown RBP7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 KLK9Q9UKQ9 250 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ZNF256Q9Y2P7 627 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMEM56-RWDD3S4R434 201 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SORL1Q92673 2214 aa7.95□□□□□ -1.14
HLA-DQB1-206ENST00000443574 A0A0B4J2A0 478 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 DUXBA0A1W2PPF3 345 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CORTO00230 105 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 BMPR1BO00238 502 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ST8SIA3O43173 380 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SCGB2A1O75556 95 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 NDUFB8O95169 186 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 LY86O95711 162 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TRBV12-3P01733 135 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 PRB2P02812 416 aaPredicted RBP7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 P0C879 139 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 IL7P13232 177 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 GPR183P32249 361 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SYNJ2BPP57105 145 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 UBE2MP61081 183 aaKnown RBP7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CLEC19AQ6UXS0 136 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 ATP6V0BQ99437 205 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CCDC32Q9BV29 185 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 BATF3Q9NR55 127 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SHPKQ9UHJ6 478 aa7.94□□□□□ -1.14
HLA-DQB1-206ENST00000443574 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 MFSD2BA6NFX1 497 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 PPP5D1E7EU14 171 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 INS-IGF2F8WCM5 200 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SULT1A3P0DMM9 295 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SULT1A4P0DMN0 295 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 KLF5Q13887 457 aaPredicted RBP7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMEM187Q14656 261 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 BAK1Q16611 211 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CNPY1Q3B7I2 92 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 FAM106AQ4KMX7 169 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SPSB3Q6PJ21 355 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 PLET1Q6UQ28 207 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 SELENOHQ8IZQ5 122 aaKnown RBP7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 OR2C3Q8N628 320 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 TMEM230Q96A57 120 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 BSCL2Q96G97 398 aaPredicted RBP7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CCDC140Q96MF4 163 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 C21orf62Q9NYP8 219 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 PTTG2Q9NZH5 202 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 CACNG5Q9UF02 275 aa7.93□□□□□ -1.14
HLA-DQB1-206ENST00000443574 A0A0B4J293 547 aa7.92□□□□□ -1.14
HLA-DQB1-206ENST00000443574 LINC00854A0A1B0GVQ3 168 aa7.92□□□□□ -1.14
HLA-DQB1-206ENST00000443574 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms