RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 LYZL6O75951 148 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 TRGC2P03986 189 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 LINC00869P0C866 280 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 INAFM2P0DMQ5 153 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BOP23527 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BBP33778 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 NDUFA6P56556 154 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BDP58876 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 COPZ1P61923 177 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BCP62807 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST2H2BEQ16778 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 VMA21Q3ZAQ7 101 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 GLYATL3Q5SZD4 288 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 RPL22L1Q6P5R6 122 aaKnown RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 SLC25A34Q6PIV7 304 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 GPHB5Q86YW7 130 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 C14orf178Q8N769 122 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 TCTEX1D1Q8N7M0 179 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 OR51A4Q8NGJ6 313 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 OR4K13Q8NH42 304 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 PPTC7Q8NI37 304 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 RPS4Y2Q8TD47 263 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 ZNF418Q8TF45 676 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BHQ93079 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 CMBLQ96DG6 245 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 CARD19Q96LW7 228 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 PEBP4Q96S96 227 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BNQ99877 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 HIST1H2BMQ99879 126 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 NKX6-2Q9C056 277 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 EFCAB1Q9HAE3 211 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 ZNF286AQ9HBT8 521 aa3.13□□□□□ -1.91
VPS50-206ENST00000443443 MCTS1Q9ULC4 181 aaKnown RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 COL4A4P53420 1690 aaPredicted RBP3.13□□□□□ -1.91
VPS50-206ENST00000443443 DISP2A7MBM2 1401 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 ADAMTS13Q76LX8 1427 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 KMT2EQ8IZD2 1858 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 IGHV3OR15-7A0A075B7D8 119 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 TRAV41A0A0B4J266 112 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 C9JCJ5 164 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 I3L521 148 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 J3QQQ9 107 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 CORTO00230 105 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 SOCS1O15524 211 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 INSP01308 110 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 PAEPP09466 180 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 P0DMU3 169 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 FAM231AP0DMU4 169 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 FAM231CP0DMU5 169 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 ZNF823P16415 610 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 ZNF32P17041 273 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 FGF7P21781 194 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 S100A4P26447 101 aaKnown RBP3.12□□□□□ -1.91
VPS50-206ENST00000443443 SDC2P34741 201 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 FGF12P61328 243 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 BSPH1Q075Z2 132 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 PSG7Q13046 419 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 RRN3P1Q2M238 152 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 SCIMPQ6UWF3 145 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 LCA10Q71F78 164 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 H1FOOQ8IZA3 346 aaPredicted RBP3.12□□□□□ -1.91
VPS50-206ENST00000443443 MMGT1Q8N4V1 131 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 TERB2Q8NHR7 220 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 H1FXQ92522 213 aaKnown RBP3.12□□□□□ -1.91
VPS50-206ENST00000443443 MAGOHBQ96A72 148 aaKnown RBP3.12□□□□□ -1.91
VPS50-206ENST00000443443 TEX37Q96LM6 180 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 CHCHD7Q9BUK0 85 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 C1QTNF6Q9BXI9 259 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 TCEAL2Q9H3H9 227 aaPredicted RBP3.12□□□□□ -1.91
VPS50-206ENST00000443443 TUBA4BQ9H853 241 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 RNF122Q9H9V4 155 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 TNFSF18Q9UNG2 199 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 CARMIL3Q8ND23 1372 aa3.12□□□□□ -1.91
VPS50-206ENST00000443443 CAMSAP2Q08AD1 1489 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 IRGMA1A4Y4 181 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 IZUMO1RA6ND01 250 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 ARRDC5A6NEK1 342 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 H0YJW9 148 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 K7ERS5 55 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 BPY2O14599 106 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 TAX1BP3O14907 124 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 ZNF73O43830 326 aaPredicted RBP3.11□□□□□ -1.91
VPS50-206ENST00000443443 APCSP02743 223 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 GPX1P07203 203 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 FKBP2P26885 142 aaKnown RBP3.11□□□□□ -1.91
VPS50-206ENST00000443443 CXCL12P48061 93 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 AKR1C2P52895 323 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 TAS2R20P59543 309 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 CCL20P78556 96 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 MSMO1Q15800 293 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
VPS50-206ENST00000443443 BCL2L15Q5TBC7 163 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 C1orf140Q5VVS0 124 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 LHFPL1Q86WI0 220 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 CTAGE3PQ8IX95 158 aa3.11□□□□□ -1.91
VPS50-206ENST00000443443 C8orf59Q8N0T1 100 aaPredicted RBP3.11□□□□□ -1.91
VPS50-206ENST00000443443 SUMF2Q8NBJ7 301 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms