RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 SPINK9Q5DT21 86 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 PDCD10Q9BUL8 212 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 CACNG5Q9UF02 275 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 SHPKQ9UHJ6 478 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 TNCP24821 2201 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 MGAM2Q2M2H8 2515 aa9.53□□□□□ -0.88
USP1-203ENST00000442679 IGLV11-55A0A075B6I3 123 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 C9orf170A2RU37 121 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 LINC01619G3V211 115 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 OR4E1P0C645 316 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 OR8U8P0C7N1 319 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 SULT1A3P0DMM9 295 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 SULT1A4P0DMN0 295 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
USP1-203ENST00000442679 IFITM3Q01628 133 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 FHL3Q13643 280 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 EXOSC2Q13868 293 aaKnown RBP9.52□□□□□ -0.89
USP1-203ENST00000442679 C15orf32Q32M92 178 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 C4orf46Q504U0 113 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 SLC25A24Q6NUK1 477 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 ZNF343Q6P1L6 599 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 LRTM2Q8N967 370 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 C20orf85Q9H1P6 137 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 PLEKHA3Q9HB20 300 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 RANGRFQ9HD47 186 aaPredicted RBP9.52□□□□□ -0.89
USP1-203ENST00000442679 DMRT1Q9Y5R6 373 aa9.52□□□□□ -0.89
USP1-203ENST00000442679 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
USP1-203ENST00000442679 TRAV6A0A075B6T7 132 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 IGHV4OR15-8A0A075B7B6 117 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 A0A087WW49 117 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 DUXBA0A1W2PPF3 345 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 HLA-AP01891 365 aaKnown RBP9.51□□□□□ -0.89
USP1-203ENST00000442679 IGLL1P15814 213 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 SPCS3P61009 180 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 DHRS2Q13268 280 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 AARDQ4LEZ3 155 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 LYG2Q86SG7 212 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 OR2C3Q8N628 320 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 OR1L6Q8NGR2 347 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 OR52E5Q8NH55 327 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 ENY2Q9NPA8 101 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 NUDT15Q9NV35 164 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 THYN1Q9P016 225 aa9.51□□□□□ -0.89
USP1-203ENST00000442679 PEF1Q9UBV8 284 aaKnown RBP9.51□□□□□ -0.89
USP1-203ENST00000442679 A0A1B0GU03 582 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 H2AFB2P0C5Z0 115 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 SNCAP37840 140 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 HOXA1P49639 335 aaPredicted RBP9.5□□□□□ -0.89
USP1-203ENST00000442679 SLURP1P55000 103 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 MFAP2P55001 183 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 SMCO1Q147U7 214 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 OR1P1Q8NH06 330 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 RCC1LQ96I51 464 aaKnown RBP9.5□□□□□ -0.89
USP1-203ENST00000442679 CACFD1Q9UGQ2 172 aa9.5□□□□□ -0.89
USP1-203ENST00000442679 WNK1Q9H4A3 2382 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
USP1-203ENST00000442679 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 G3V4G9 280 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 DUS4LO95620 317 aaKnown RBP9.49□□□□□ -0.89
USP1-203ENST00000442679 TRBV12-3P01733 135 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 IGHV3-23P01764 117 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 HOXB5P09067 269 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 PDLIM3Q53GG5 364 aaPredicted RBP9.49□□□□□ -0.89
USP1-203ENST00000442679 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 ZNF114Q8NC26 417 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 OR52B4Q8NGK2 314 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 ENKURQ8TC29 256 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 DCUN1D4Q92564 292 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
USP1-203ENST00000442679 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 CXorf58Q96LI9 332 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
USP1-203ENST00000442679 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 S4R3C0 116 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
USP1-203ENST00000442679 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 CEBPZOSA8MTT3 80 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 NXPH3O95157 252 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 ZP3P21754 424 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 HOXD3P31249 432 aaPredicted RBP9.48□□□□□ -0.89
USP1-203ENST00000442679 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP1-203ENST00000442679 DEFA1P59665 94 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 DEFA3P59666 94 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 CLEC19AQ6UXS0 136 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 C1QL4Q86Z23 238 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 MISP3Q96FF7 219 aa9.48□□□□□ -0.89
USP1-203ENST00000442679 HEYLQ9NQ87 328 aaPredicted RBP9.48□□□□□ -0.89
USP1-203ENST00000442679 IGHV3-21A0A0B4J1V1 117 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms