RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LGI3Q8N145 548 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 CENPSQ8N2Z9 138 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 DLX4Q92988 240 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 CXorf58Q96LI9 332 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 PDCD10Q9BUL8 212 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 ZMAT5Q9UDW3 170 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 TRBV7-1A0A0A6YYK4 115 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 A0A0B4J2A0 478 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 A0A0G2JRQ6 117 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 ANKRD34BA5PLL1 514 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 NDUFB8O95169 186 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 CCR6P51684 374 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 SLURP1P55000 103 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 ERHP84090 104 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 EGFEM1PQ0D2K5 195 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 IZUMO4Q1ZYL8 232 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 TMED4Q7Z7H5 227 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 OR1P1Q8NH06 330 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 EEF1AKMT3Q96AZ1 226 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 SHPKQ9UHJ6 478 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
CSNK1E-210ENST00000442216 CMYA5Q8N3K9 4069 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 SEC14L6B5MCN3 397 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 ST8SIA3O43173 380 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 BTCP35070 178 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 KLF5Q13887 457 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 SLC25A24Q6NUK1 477 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 Q6ZRM9 215 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 LRTM2Q8N967 370 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 GPR146Q96CH1 333 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 ATP6V0BQ99437 205 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 WDR12Q9GZL7 423 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 PLEKHA3Q9HB20 300 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 DMRT1Q9Y5R6 373 aa11.55□□□□□ -0.56
CSNK1E-210ENST00000442216 PLA2G10O15496 165 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 LYRM1O43325 122 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 SFT2D2O95562 160 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 IFNA17P01571 189 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 SPCS3P61009 180 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 TATDN3Q17R31 274 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 RPEL1Q2QD12 228 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
CSNK1E-210ENST00000442216 LINC00854A0A1B0GVQ3 168 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 BMPR1BO00238 502 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 SULT1A3P0DMM9 295 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 SULT1A4P0DMN0 295 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 VAMP1P23763 118 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 ZNF846Q147U1 533 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
CSNK1E-210ENST00000442216 MFSD2BA6NFX1 497 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 GGCTO75223 188 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 SLC25A6P12236 298 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 SUB1P53999 127 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 MFAP2P55001 183 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 ENY2Q9NPA8 101 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 PRR13Q9NZ81 148 aa11.52□□□□□ -0.57
CSNK1E-210ENST00000442216 A0A1B0GU03 582 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 ARL3P36405 182 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 SNCAP37840 140 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 SMCO1Q147U7 214 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 PEMTQ9UBM1 199 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 TMED3Q9Y3Q3 217 aa11.51□□□□□ -0.57
CSNK1E-210ENST00000442216 SORL1Q92673 2214 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 K7EIM0 57 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 LGALS9O00182 355 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 CORTO00230 105 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 SAP30O75446 220 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 CLEC3BP05452 202 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 OR4E1P0C645 316 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 HOXA1P49639 335 aaPredicted RBP11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 SYNJ2BPP57105 145 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
CSNK1E-210ENST00000442216 ANKRD55Q3KP44 614 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms