RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C5orf30Q96GV9 206 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 PYGO2Q9BRQ0 406 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 PBDC1Q9BVG4 233 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 SSBP3Q9BWW4 388 aaPredicted RBP6.61□□□□□ -1.35
CCDC39-201ENST00000442201 AKAP6Q13023 2319 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 A0A1B0GV72 72 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 MSGN1A6NI15 193 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 H3BQ15 152 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 RAB29O14966 203 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 SCGB1D2O95969 90 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 DLX6P56179 175 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 UTF1Q5T230 341 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 PRSS54Q6PEW0 395 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF295-AS1Q8N0V1 137 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 TCTEX1D1Q8N7M0 179 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.61□□□□□ -1.35
CCDC39-201ENST00000442201 LFNGQ8NES3 379 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 C8orf46Q8TAG6 207 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 SRD5A3Q9H8P0 318 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 WFDC1Q9HC57 220 aa6.61□□□□□ -1.35
CCDC39-201ENST00000442201 M0R1X1 148 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 VDAC1P21796 283 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-201ENST00000442201 ATP5J2P56134 94 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 RPL30P62888 115 aaKnown RBP6.6□□□□□ -1.35
CCDC39-201ENST00000442201 EIF4EBP1Q13541 118 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-201ENST00000442201 SOHLH1Q5JUK2 328 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 SLC25A48Q6ZT89 311 aaKnown RBP6.6□□□□□ -1.35
CCDC39-201ENST00000442201 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 C17orf98A8MV24 154 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 PROP1O75360 226 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 LIPFP07098 398 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 IGHV1-8P0DP01 117 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 PINX1Q96BK5 328 aaKnown RBP6.6□□□□□ -1.35
CCDC39-201ENST00000442201 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 SLC45A2Q9UMX9 530 aa6.6□□□□□ -1.35
CCDC39-201ENST00000442201 RBP4P02753 201 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 COL8A1P27658 744 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 DUTP33316 252 aaKnown RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 ZNF585BQ52M93 769 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 RPL39P5Q59GN2 51 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 LY6G5BQ8NDX9 201 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 STXBP6Q8NFX7 210 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 S1PR3Q99500 378 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 MALRD1Q5VYJ5 2156 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 SAA2-SAA4A0A096LPE2 208 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 LINC00473A8K010 186 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 CORTO00230 105 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 RAMP3O60896 148 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 SAA2P0DJI9 122 aaPredicted RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 OR13C7P0DN81 318 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 IL15RAQ13261 267 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 C8orf31Q8N9H6 132 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 OR9G1Q8NH87 305 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 FAM168AQ92567 244 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM133Q9H2Q1 129 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 LYRM2Q9NU23 88 aaPredicted RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 FUT9Q9Y231 359 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 PET100P0DJ07 73 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 RAB32Q13637 225 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 PMS2P11Q13670 270 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM183BQ1AE95 376 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 NMSQ5H8A3 153 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 TPTE2P1Q5T6R2 138 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 RPL7L1Q6DKI1 246 aaKnown RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 ABHD12Q8N2K0 398 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 PIP4P2Q8N4L2 257 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 TMEM170AQ8WVE7 144 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 EIF5A2Q9GZV4 153 aaKnown RBP6.59□□□□□ -1.35
CCDC39-201ENST00000442201 ONECUT1Q9UBC0 465 aa6.59□□□□□ -1.35
CCDC39-201ENST00000442201 J3QR06 171 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 LINC00205P59089 165 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 S100A10P60903 97 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 TDRG1Q3Y452 100 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF787Q6DD87 383 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 OR10X1Q8NGY0 326 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 CLDND2Q8NHS1 167 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 LSM10Q969L4 123 aaKnown RBP6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ADTRPQ96IZ2 230 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 TBX15Q96SF7 602 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 PIMREGQ9BSJ6 248 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 HIPK2Q9H2X6 1198 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
CCDC39-201ENST00000442201 JTBO76095 146 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 SCGB1D1O95968 90 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 CTRLP40313 264 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 THBS3P49746 956 aa6.58□□□□□ -1.36
CCDC39-201ENST00000442201 ZNF816Q0VGE8 651 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-201ENST00000442201 NRGNQ92686 78 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms