RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 EIF4EP06730 217 aaKnown RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 GNRHRP30968 328 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 SUB1P53999 127 aaKnown RBP eCLIP5.85□□□□□ -1.47
CD44-211ENST00000442151 MFAP4P55083 255 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 TAS2R20P59543 309 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 DEFB125Q8N687 156 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 AP3S1Q92572 193 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 HINT2Q9BX68 163 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 C21orf62Q9NYP8 219 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 CACFD1Q9UGQ2 172 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 TP53TG1Q9Y2A0 90 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 DMRT1Q9Y5R6 373 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 F11RQ9Y624 299 aaKnown RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 IGLC7A0M8Q6 106 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 MARCH11A6NNE9 402 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 RBMXL2O75526 392 aaKnown RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 B3GALNT1O75752 331 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 KRASP01116 189 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 REG1AP05451 166 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 CD7P09564 240 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 GPR183P32249 361 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 RCVRNP35243 200 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 RORCP51449 518 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 BRWD1-AS2P59051 145 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 Q56UQ5 140 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 H2BFWTQ7Z2G1 175 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 ZNF486Q96H40 463 aaPredicted RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 FAM110AQ9BQ89 295 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 PDCD10Q9BUL8 212 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 DAZ1Q9NQZ3 744 aaKnown RBP5.85□□□□□ -1.47
CD44-211ENST00000442151 NDUFA4L2Q9NRX3 87 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 ANAPC10Q9UM13 185 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
CD44-211ENST00000442151 KIR2DL5BA0A0G2JN68 375 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 KIR2DL5BA0A0G2JPC4 375 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TMEM213A2RRL7 107 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 RBMY1BA6NDE4 496 aaKnown RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 RBMY1EA6NEQ0 496 aaKnown RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 C15orf62A8K5M9 175 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 E7EUB6 86 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 CORTO00230 105 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TSPAN4O14817 238 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 S1PR2O95136 353 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 HLA-AP01891 365 aaKnown RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 RLN1P04808 185 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 RBMY1DP0C7P1 496 aaKnown RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 TBPP20226 339 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 RPS19P39019 145 aaKnown RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 RFX2P48378 723 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 ADAMTSL5Q6ZMM2 481 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 Q6ZWC4 215 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TMEM61Q8N0U2 210 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 KIR2DL5AQ8N109 375 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 STPG3Q8N7X2 389 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 OR1P1Q8NH06 330 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 KIR2DL5BQ8NHK3 375 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 ZFAND1Q8TCF1 268 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 SLC25A46Q96AG3 418 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 WDR89Q96FK6 387 aaPredicted RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 GINS3Q9BRX5 216 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TMEM231Q9H6L2 316 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 RABL2AQ9UBK7 228 aaPredicted RBP5.84□□□□□ -1.47
CD44-211ENST00000442151 RABL2BQ9UNT1 228 aa5.84□□□□□ -1.47
CD44-211ENST00000442151 TENM3Q9P273 2699 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 MEIS3P1A6NDR6 274 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 MFSD2BA6NFX1 497 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 SCAF4O95104 1147 aaKnown RBP5.83□□□□□ -1.48
CD44-211ENST00000442151 SNCAP37840 140 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 NPBWR1P48145 328 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 HSPE1P61604 102 aaKnown RBP5.83□□□□□ -1.48
CD44-211ENST00000442151 ZNF124Q15973 351 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 BTNL8Q6UX41 500 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 CCDC71LQ8N9Z2 235 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 DUSP18Q8NEJ0 188 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 GPX8Q8TED1 209 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 TMEM190Q8WZ59 177 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 YIPF6Q96EC8 236 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 GALNT14Q96FL9 552 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 NARS2Q96I59 477 aaKnown RBP5.83□□□□□ -1.48
CD44-211ENST00000442151 RNF167Q9H6Y7 350 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 ENY2Q9NPA8 101 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 MLXQ9UH92 298 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 PFDN2Q9UHV9 154 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 PIGBOS1A0A0B4J2F0 54 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 OR2T8A6NH00 312 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 CGB1A6NKQ9 187 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 FAM25AB3EWG3 89 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 FAM25CB3EWG5 89 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 FAM25GB3EWG6 89 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 SPRY2O43597 315 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 PTHLHP12272 177 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 PGAM2P15259 253 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 FCGR2BP31994 310 aaPredicted RBP5.83□□□□□ -1.48
CD44-211ENST00000442151 G6PCP35575 357 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 WFDC3Q8IUB2 231 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 SCARB1Q8WTV0 552 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 FCAMRQ8WWV6 532 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms