RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 LFNGQ8NES3 379 aa16.6■□□□□ 0.25
VPS13B-204ENST00000441350 SLC24A4Q8NFF2 622 aa16.6■□□□□ 0.25
VPS13B-204ENST00000441350 TMEM170AQ8WVE7 144 aa16.6■□□□□ 0.25
VPS13B-204ENST00000441350 PRSS22Q9GZN4 317 aa16.6■□□□□ 0.25
VPS13B-204ENST00000441350 STRAPQ9Y3F4 350 aaKnown RBP16.6■□□□□ 0.25
VPS13B-204ENST00000441350 RNF222A6NCQ9 220 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 FAM181BA6NEQ2 426 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 C15orf62A8K5M9 175 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 IFNA10P01566 189 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 REG1AP05451 166 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 HNRNPCP07910 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 HKR1P10072 659 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 RNASE2P10153 161 aaKnown RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 TMEM252Q8N6L7 170 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 ZNF114Q8NC26 417 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 AQP10Q96PS8 301 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 ZNF702PQ9H963 129 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 CUBNO60494 3623 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 IGSF23A1L1A6 192 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 CRYGCP07315 174 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 CTRB1P17538 263 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 RPL12P30050 165 aaKnown RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 SNCAP37840 140 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 ATP5IP56385 69 aaPredicted RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 RPL15P61313 204 aaKnown RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 RPP30P78346 268 aaKnown RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 AKIRIN2Q53H80 203 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 C19orf54Q5BKX5 351 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 CTRB2Q6GPI1 263 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 Q8N2B8 174 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 TTC9CQ8N5M4 171 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 INO80EQ8NBZ0 244 aaPredicted RBP16.59■□□□□ 0.25
VPS13B-204ENST00000441350 TMEM68Q96MH6 324 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 ZNF580Q9UK33 172 aa16.59■□□□□ 0.25
VPS13B-204ENST00000441350 NF1P21359 2839 aa16.58■□□□□ 0.25
VPS13B-204ENST00000441350 NPIPB5A8MRT5 1133 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 NPY1RP25929 384 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 C2orf83Q53S99 150 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 ACOT7LQ6ZUV0 252 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 P2RX4Q99571 388 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 SLC25A31Q9H0C2 315 aa16.58■□□□□ 0.24
VPS13B-204ENST00000441350 TEP1Q99973 2627 aaKnown RBP16.57■□□□□ 0.24
VPS13B-204ENST00000441350 G3V318 75 aa16.57■□□□□ 0.24
VPS13B-204ENST00000441350 AP4M1O00189 453 aa16.57■□□□□ 0.24
VPS13B-204ENST00000441350 NKX2-5P52952 324 aaPredicted RBP16.57■□□□□ 0.24
VPS13B-204ENST00000441350 EWSR1Q01844 656 aaKnown RBP eCLIP16.57■□□□□ 0.24
VPS13B-204ENST00000441350 TMEM267Q0VDI3 215 aaPredicted RBP16.57■□□□□ 0.24
VPS13B-204ENST00000441350 PVRIGQ6DKI7 326 aa16.57■□□□□ 0.24
VPS13B-204ENST00000441350 UNQ5815/PRO19632Q6UWF5 114 aa16.57■□□□□ 0.24
VPS13B-204ENST00000441350 MFFQ9GZY8 342 aa16.57■□□□□ 0.24
VPS13B-204ENST00000441350 TRAV41A0A0B4J266 112 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 PMS2P5A8MQ11 134 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 TCF21O43680 179 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 METTL15P1P0C7V9 234 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 CXCL2P19875 107 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 NUP62P37198 522 aaPredicted RBP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 EIF2B2P49770 351 aaKnown RBP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 ECSCRQ19T08 205 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 C19orf35Q6ZS72 473 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 F11RQ9Y624 299 aaKnown RBP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 FBXO24O75426 580 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 SULT1A1P50225 295 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 SUB1P53999 127 aaKnown RBP eCLIP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 MFAP2P55001 183 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 NHLH2Q02577 135 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 OR2F1Q13607 317 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 ZNF345Q14585 488 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 LGALSLQ3ZCW2 172 aaPredicted RBP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 LAMTOR1Q6IAA8 161 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 HAPLN4Q86UW8 402 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 C9orf62Q8N4C0 152 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 OR1P1Q8NH06 330 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 FAM110DQ8TAY7 271 aaPredicted RBP16.56■□□□□ 0.24
VPS13B-204ENST00000441350 WNT10AQ9GZT5 417 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 LINC00527Q9UJ94 153 aa16.56■□□□□ 0.24
VPS13B-204ENST00000441350 NIPBLQ6KC79 2804 aaeCLIP16.55■□□□□ 0.24
VPS13B-204ENST00000441350 CST7O76096 145 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 RAB11AP62491 216 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 BAXQ07812 192 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 TMEM95Q3KNT9 176 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 STX12Q86Y82 276 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 OR5T1Q8NG75 326 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 NOL4LQ96MY1 436 aaPredicted RBP16.55■□□□□ 0.24
VPS13B-204ENST00000441350 PAIP2BQ9ULR5 123 aaKnown RBP16.55■□□□□ 0.24
VPS13B-204ENST00000441350 HSPB11Q9Y547 144 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 DMRT1Q9Y5R6 373 aa16.55■□□□□ 0.24
VPS13B-204ENST00000441350 TSPAN9O75954 239 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 OR8U8P0C7N1 319 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 ARL16Q0P5N6 197 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 Q6ZSV7 163 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 STPG2Q8N412 459 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 KCNRGQ8N5I3 272 aa16.54■□□□□ 0.24
VPS13B-204ENST00000441350 BSCL2Q96G97 398 aaPredicted RBP16.54■□□□□ 0.24
VPS13B-204ENST00000441350 PRSS46E5RG02 174 aa16.53■□□□□ 0.24
VPS13B-204ENST00000441350 AP2S1P53680 142 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-204ENST00000441350 KLK9Q2XQG4 91 aa16.53■□□□□ 0.24
VPS13B-204ENST00000441350 ETV3LQ6ZN32 361 aa16.53■□□□□ 0.24
VPS13B-204ENST00000441350 ZC4H2Q9NQZ6 224 aa16.53■□□□□ 0.24
VPS13B-204ENST00000441350 KLK9Q9UKQ9 250 aa16.53■□□□□ 0.24
VPS13B-204ENST00000441350 A0A0D9SG52 128 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms