RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 THAP7Q9BT49 309 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-217ENST00000439669 C5orf66Q9H5L9 145 aa18.27■□□□□ 0.52
CPNE1-217ENST00000439669 ZNF701M0R085 212 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-217ENST00000439669 B3GALNT1O75752 331 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 OR5AC1P0C628 307 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 MFAP2P55001 183 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 PRCDQ00LT1 54 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 LCN12Q6JVE5 192 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 GPHB5Q86YW7 130 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 OR1L6Q8NGR2 347 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 VN1R17PQ8TDU5 208 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 NAA60Q9H7X0 242 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 SCP2D1Q9UJQ7 156 aa18.26■□□□□ 0.51
CPNE1-217ENST00000439669 IGHV3-21A0A0B4J1V1 117 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 ZNF320A2RRD8 509 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 HSPE1P61604 102 aaKnown RBP18.25■□□□□ 0.51
CPNE1-217ENST00000439669 FAM106AQ4KMX7 169 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 RRNAD1Q96FB5 475 aaKnown RBP18.25■□□□□ 0.51
CPNE1-217ENST00000439669 PLEKHA3Q9HB20 300 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 SLC2A8Q9NY64 477 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 GPR132Q9UNW8 380 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 V9GYH0 126 aa18.25■□□□□ 0.51
CPNE1-217ENST00000439669 C2orf70A6NJV1 201 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 LGALS9O00182 355 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 SPINK9Q5DT21 86 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 PLET1Q6UQ28 207 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 Q8N402 240 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 OR2C3Q8N628 320 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 ASCL2Q99929 193 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 TMEM222Q9H0R3 208 aa18.24■□□□□ 0.51
CPNE1-217ENST00000439669 P0C879 139 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 EDN2P20800 178 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 ADAMTSL5Q6ZMM2 481 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 SLC35G3Q8N808 338 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 OR1P1Q8NH06 330 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 PDCD10Q9BUL8 212 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 C21orf62Q9NYP8 219 aa18.23■□□□□ 0.51
CPNE1-217ENST00000439669 A0A0B4J293 547 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 IGHV3-35A0A0C4DH35 117 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 OR2T8A6NH00 312 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 CRYM-AS1A6NIL9 109 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 ST8SIA3O43173 380 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 TGOLN2O43493 480 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 IFNA17P01571 189 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 FOLR2P14207 255 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 FAUP35544 74 aaKnown RBP18.22■□□□□ 0.51
CPNE1-217ENST00000439669 AP3S2P59780 193 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 ERHP84090 104 aaKnown RBP18.22■□□□□ 0.51
CPNE1-217ENST00000439669 UBAC2Q8NBM4 344 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 OR2K2Q8NGT1 345 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 TRIM63Q969Q1 353 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 MISP3Q96FF7 219 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 SCGB3A2Q96PL1 93 aa18.22■□□□□ 0.51
CPNE1-217ENST00000439669 A0A0G2JRQ6 117 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 IZUMO1RA6ND01 250 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 K7EIM0 57 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 DHODHQ02127 395 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 ZNF79Q15937 498 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 CD300EQ496F6 205 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-217ENST00000439669 SGPP2Q8IWX5 399 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 TOMM5Q8N4H5 51 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 SCARB1Q8WTV0 552 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 GLYATL2Q8WU03 294 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 CACNG8Q8WXS5 425 aa18.21■□□□□ 0.51
CPNE1-217ENST00000439669 CDS2O95674 445 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 NHLRC4P0CG21 123 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-217ENST00000439669 KLF9Q13886 244 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-217ENST00000439669 Q56UQ5 140 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 CCDC190Q86UF4 302 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 GTSCR1Q86UQ5 136 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 ZNF114Q8NC26 417 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 LHFPL5Q8TAF8 219 aa18.2■□□□□ 0.5
CPNE1-217ENST00000439669 RBPMSQ93062 196 aaKnown RBP18.2■□□□□ 0.5
CPNE1-217ENST00000439669 BSCL2Q96G97 398 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-217ENST00000439669 TMEM213A2RRL7 107 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 A8MWP6 167 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 FRMD6-AS1P0C7T7 363 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 HOXA1P49639 335 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-217ENST00000439669 SPANXN2Q5MJ10 180 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 TMEM268Q5VZI3 342 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 UNQ9165/PRO28630Q6UXU0 137 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 FAM219AQ8IW50 185 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 PALMDQ9NP74 551 aa18.19■□□□□ 0.5
CPNE1-217ENST00000439669 CBLN1P23435 193 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 DEFB114Q30KQ6 69 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 SELENOHQ8IZQ5 122 aaKnown RBP18.18■□□□□ 0.5
CPNE1-217ENST00000439669 Q8N1Y9 231 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 TMEM230Q96A57 120 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 PINX1Q96BK5 328 aaKnown RBP18.18■□□□□ 0.5
CPNE1-217ENST00000439669 ENY2Q9NPA8 101 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 TECRQ9NZ01 308 aaKnown RBP18.18■□□□□ 0.5
CPNE1-217ENST00000439669 KCNIP3Q9Y2W7 256 aa18.18■□□□□ 0.5
CPNE1-217ENST00000439669 IGHV4-30-4P0DP06 118 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 AKR1C4P17516 323 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 SNCAP37840 140 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 ETV6P41212 452 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 TM4SF20Q53R12 229 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 SPSB3Q6PJ21 355 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 ATP6V0BQ99437 205 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 UFC1Q9Y3C8 167 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms