RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 DEFA3P59666 94 aa13.09□□□□□ -0.31
TARDBP-203ENST00000439080 AARDQ4LEZ3 155 aa13.09□□□□□ -0.31
TARDBP-203ENST00000439080 MRPL41Q8IXM3 137 aaKnown RBP13.09□□□□□ -0.31
TARDBP-203ENST00000439080 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
TARDBP-203ENST00000439080 USMG5Q96IX5 58 aa13.09□□□□□ -0.31
TARDBP-203ENST00000439080 H2AFB2P0C5Z0 115 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 MYCNOSP40205 109 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 HOXA1P49639 335 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-203ENST00000439080 FHL3Q13643 280 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 C15orf32Q32M92 178 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 OR11H1Q8NG94 326 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 OR52B4Q8NGK2 314 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 COQ8AQ8NI60 647 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 FANCD2OSQ96PS1 177 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 P2RX4Q99571 388 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-203ENST00000439080 DMRT1Q9Y5R6 373 aa13.08□□□□□ -0.31
TARDBP-203ENST00000439080 F11RQ9Y624 299 aaKnown RBP13.08□□□□□ -0.31
TARDBP-203ENST00000439080 NXPH3O95157 252 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
TARDBP-203ENST00000439080 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
TARDBP-203ENST00000439080 EXOSC2Q13868 293 aaKnown RBP13.07□□□□□ -0.32
TARDBP-203ENST00000439080 SMCO1Q147U7 214 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 KLK9Q2XQG4 91 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 FBXL7Q9UJT9 491 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 KLK9Q9UKQ9 250 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 IGHV4OR15-8A0A075B7B6 117 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 A0A087WW49 117 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 CYB5BO43169 146 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 HOXB5P09067 269 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 SPCS3P61009 180 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 OR2C3Q8N628 320 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 ZNF114Q8NC26 417 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 OR1N2Q8NGR9 330 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
TARDBP-203ENST00000439080 NDUFB8O95169 186 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 CD33P20138 364 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 MFAP2P55001 183 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 PDLIM3Q53GG5 364 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-203ENST00000439080 ZNF343Q6P1L6 599 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 SEC22CQ9BRL7 303 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 ENY2Q9NPA8 101 aa13.06□□□□□ -0.32
TARDBP-203ENST00000439080 A0A1B0GU03 582 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 ANKRD34BA5PLL1 514 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 MFSD2BA6NFX1 497 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 INS-IGF2F8WCM5 200 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 LINC01619G3V211 115 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 ADAP1O75689 374 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 OR8U8P0C7N1 319 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 ERHP84090 104 aaKnown RBP13.05□□□□□ -0.32
TARDBP-203ENST00000439080 GGNBP1Q5YKI7 109 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 OR1P1Q8NH06 330 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 OR1S1Q8NH92 325 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 DPF1Q92782 380 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 THYN1Q9P016 225 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 S4R3C0 116 aa13.05□□□□□ -0.32
TARDBP-203ENST00000439080 CEBPZOSA8MTT3 80 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 IGHV3-23P01764 117 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 HSPB1P04792 205 aaKnown RBP13.04□□□□□ -0.32
TARDBP-203ENST00000439080 SLC25A6P12236 298 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 SLC25A24Q6NUK1 477 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 OR1L6Q8NGR2 347 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 ZNF431Q8TF32 576 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-203ENST00000439080 EEF1AKMT3Q96AZ1 226 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 CACFD1Q9UGQ2 172 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 FBN3Q75N90 2809 aa13.04□□□□□ -0.32
TARDBP-203ENST00000439080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
TARDBP-203ENST00000439080 PITX3O75364 302 aa13.03□□□□□ -0.32
TARDBP-203ENST00000439080 SLURP1P55000 103 aa13.03□□□□□ -0.32
TARDBP-203ENST00000439080 PLET1Q6UQ28 207 aa13.03□□□□□ -0.32
TARDBP-203ENST00000439080 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
TARDBP-203ENST00000439080 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
TARDBP-203ENST00000439080 RANGRFQ9HD47 186 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-203ENST00000439080 PEF1Q9UBV8 284 aaKnown RBP13.03□□□□□ -0.32
TARDBP-203ENST00000439080 MPTX1A8MV57 137 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 HOXD3P31249 432 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-203ENST00000439080 SNCAP37840 140 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 WFDC9Q8NEX5 89 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 MISP3Q96FF7 219 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 PALMDQ9NP74 551 aa13.02□□□□□ -0.33
TARDBP-203ENST00000439080 HEYLQ9NQ87 328 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-203ENST00000439080 IFNA21P01568 189 aa13.01□□□□□ -0.33
TARDBP-203ENST00000439080 RNASE2P10153 161 aaKnown RBP13.01□□□□□ -0.33
TARDBP-203ENST00000439080 FAM209BQ5JX69 171 aa13.01□□□□□ -0.33
TARDBP-203ENST00000439080 RBKSQ9H477 322 aa13.01□□□□□ -0.33
TARDBP-203ENST00000439080 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
TARDBP-203ENST00000439080 IGHV3-21A0A0B4J1V1 117 aa13□□□□□ -0.33
TARDBP-203ENST00000439080 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
TARDBP-203ENST00000439080 PPP5D1E7EU14 171 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms