RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PRCDQ00LT1 54 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 SP6Q3SY56 376 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 FAM106AQ4KMX7 169 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 PYDC2Q56P42 97 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 ZNF502Q8TBZ5 544 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 RRNAD1Q96FB5 475 aaKnown RBP18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 C5orf66Q9H5L9 145 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 MCUBQ9NWR8 336 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 GPR132Q9UNW8 380 aa18.83■□□□□ 0.6
RAPGEF1-206ENST00000438647 IGKV1-5P01602 117 aa18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 FAUP35544 74 aaKnown RBP18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 AP3S2P59780 193 aa18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 LCN12Q6JVE5 192 aa18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 Q8N402 240 aa18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 RNASE11Q8TAA1 199 aaKnown RBP18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 RTBDNQ9BSG5 229 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 NAA60Q9H7X0 242 aa18.82■□□□□ 0.6
RAPGEF1-206ENST00000438647 GPR183P32249 361 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 OR2K2Q8NGT1 345 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 OR1P1Q8NH06 330 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 ATP6V0BQ99437 205 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 PDCD10Q9BUL8 212 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 TMEM222Q9H0R3 208 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 PLEKHA3Q9HB20 300 aa18.81■□□□□ 0.6
RAPGEF1-206ENST00000438647 OR5AC1P0C628 307 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 P0C879 139 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 NHLRC4P0CG21 123 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 ERHP84090 104 aaKnown RBP18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 DHODHQ02127 395 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 PLET1Q6UQ28 207 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 OR2C3Q8N628 320 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 V9GYH0 126 aa18.8■□□□□ 0.6
RAPGEF1-206ENST00000438647 CRYM-AS1A6NIL9 109 aa18.79■□□□□ 0.6
RAPGEF1-206ENST00000438647 CDS2O95674 445 aa18.79■□□□□ 0.6
RAPGEF1-206ENST00000438647 FAM219AQ8IW50 185 aa18.79■□□□□ 0.6
RAPGEF1-206ENST00000438647 ZNF114Q8NC26 417 aa18.79■□□□□ 0.6
RAPGEF1-206ENST00000438647 DYNLRB2Q8TF09 96 aa18.79■□□□□ 0.6
RAPGEF1-206ENST00000438647 A0A0B4J293 547 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 ZNF320A2RRD8 509 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 C2orf70A6NJV1 201 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 IFNA17P01571 189 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 MFAP2P55001 183 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 IZUMO4Q1ZYL8 232 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 SPANXN2Q5MJ10 180 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 CCDC190Q86UF4 302 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 SGPP2Q8IWX5 399 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 TOMM5Q8N4H5 51 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 GLYATL2Q8WU03 294 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 DEDD2Q8WXF8 326 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 TRIM63Q969Q1 353 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 BSCL2Q96G97 398 aaPredicted RBP18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 C21orf62Q9NYP8 219 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 KCNIP3Q9Y2W7 256 aa18.78■□□□□ 0.6
RAPGEF1-206ENST00000438647 A8MWP6 167 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 TGOLN2O43493 480 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 SPSB3Q6PJ21 355 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 SLC35G3Q8N808 338 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 SCARB1Q8WTV0 552 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 RBPMSQ93062 196 aaKnown RBP18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 PALMDQ9NP74 551 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 ZC4H2Q9NQZ6 224 aa18.77■□□□□ 0.6
RAPGEF1-206ENST00000438647 ST8SIA3O43173 380 aa18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 FOLR2P14207 255 aa18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 ETV6P41212 452 aa18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 KLF9Q13886 244 aaPredicted RBP18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 ZNF79Q15937 498 aa18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 GAR1Q9NY12 217 aaKnown RBP18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 TECRQ9NZ01 308 aaKnown RBP18.76■□□□□ 0.59
RAPGEF1-206ENST00000438647 COL7A1Q02388 2944 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 OR2T8A6NH00 312 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 INS-IGF2F8WCM5 200 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 K7EIM0 57 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 SNCAP37840 140 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 ADAMTSL5Q6ZMM2 481 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 GTSCR1Q86UQ5 136 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 GALNT14Q96FL9 552 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 NDUFA13Q9P0J0 144 aa18.75■□□□□ 0.59
RAPGEF1-206ENST00000438647 IGHV3-21A0A0B4J1V1 117 aa18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 CBLN1P23435 193 aa18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 CD300EQ496F6 205 aaPredicted RBP18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 MISP3Q96FF7 219 aa18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 ENY2Q9NPA8 101 aa18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 UFC1Q9Y3C8 167 aa18.74■□□□□ 0.59
RAPGEF1-206ENST00000438647 TMEM213A2RRL7 107 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 HOXA1P49639 335 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 ELLP55199 621 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 DEFB114Q30KQ6 69 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 Q56UQ5 140 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 SPINK9Q5DT21 86 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 TMEM268Q5VZI3 342 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 C11orf87Q6NUJ2 197 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 SELENOHQ8IZQ5 122 aaKnown RBP18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 UBAC2Q8NBM4 344 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 LHFPL5Q8TAF8 219 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 IL22RA2Q969J5 263 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 MARC2Q969Z3 335 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 ZNF436Q9C0F3 470 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 TMEM56-RWDD3S4R434 201 aa18.73■□□□□ 0.59
RAPGEF1-206ENST00000438647 A0A0G2JRQ6 117 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms