RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 PEF1Q9UBV8 284 aaKnown RBP18.36■□□□□ 0.53
RBFOX2-209ENST00000438146 CACNG5Q9UF02 275 aa18.36■□□□□ 0.53
RBFOX2-209ENST00000438146 LYRM1O43325 122 aa18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 HIST1H1BP16401 226 aaKnown RBP18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 HOXD3P31249 432 aaPredicted RBP18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 SLC25A24Q6NUK1 477 aa18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 ZNF429Q86V71 674 aa18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 PDCD10Q9BUL8 212 aa18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 PLEKHA3Q9HB20 300 aa18.35■□□□□ 0.53
RBFOX2-209ENST00000438146 MEGF8Q7Z7M0 2845 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 PRB2P02812 416 aaPredicted RBP18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 MFAP2P55001 183 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 LYZL2Q7Z4W2 148 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 FAM219AQ8IW50 185 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 LGI3Q8N145 548 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 IL22RA2Q969J5 263 aa18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 MCRIP2Q9BUT9 160 aaKnown RBP18.34■□□□□ 0.53
RBFOX2-209ENST00000438146 MFSD2BA6NFX1 497 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 SEC14L6B5MCN3 397 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 OVOL1O14753 267 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 NXPH3O95157 252 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 DUS4LO95620 317 aaKnown RBP18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 ZNF846Q147U1 533 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 ANKRD55Q3KP44 614 aa18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 WDR12Q9GZL7 423 aaKnown RBP18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 F11RQ9Y624 299 aaKnown RBP18.33■□□□□ 0.53
RBFOX2-209ENST00000438146 IGHV3-21A0A0B4J1V1 117 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 PPP5D1E7EU14 171 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 SFT2D2O95562 160 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 SRPXP78539 464 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 NOTCH1P46531 2555 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 NOTCH3Q9UM47 2321 aa18.32■□□□□ 0.52
RBFOX2-209ENST00000438146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 ANXA7P20073 488 aaKnown RBP18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 ZP3P21754 424 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 HOXA1P49639 335 aaPredicted RBP18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 KLK9Q2XQG4 91 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 CLEC19AQ6UXS0 136 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 OR2C3Q8N628 320 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 EEF1AKMT3Q96AZ1 226 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 CCDC140Q96MF4 163 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 KLK9Q9UKQ9 250 aa18.31■□□□□ 0.52
RBFOX2-209ENST00000438146 A0A0B4J2A0 478 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 BMPR1BO00238 502 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 CYB5BO43169 146 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 KPRPQ5T749 579 aaPredicted RBP18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 ZC4H2Q9NQZ6 224 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 THYN1Q9P016 225 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 SHPKQ9UHJ6 478 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 HLA-AP01891 365 aaKnown RBP18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 ERHP84090 104 aaKnown RBP18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 RPEL1Q2QD12 228 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 ENY2Q9NPA8 101 aa18.3■□□□□ 0.52
RBFOX2-209ENST00000438146 SULT1A3P0DMM9 295 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 SULT1A4P0DMN0 295 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 SYNJ2BPP57105 145 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 NMSQ5H8A3 153 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 OR1P1Q8NH06 330 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 MISP3Q96FF7 219 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 CXorf58Q96LI9 332 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 GPR61Q9BZJ8 451 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 C20orf85Q9H1P6 137 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 TBC1D24Q9ULP9 559 aa18.29■□□□□ 0.52
RBFOX2-209ENST00000438146 C9orf170A2RU37 121 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 UPK1BO75841 260 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 KRTAP10-11P60412 298 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 SPCS3P61009 180 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 C4orf46Q504U0 113 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 C9orf66Q5T8R8 295 aa18.28■□□□□ 0.52
RBFOX2-209ENST00000438146 TRAV6A0A075B6T7 132 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 SAP30O75446 220 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 OR4E1P0C645 316 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 GPR183P32249 361 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 ARL3P36405 182 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 SNCAP37840 140 aa18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 UBE2MP61081 183 aaKnown RBP18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 KLF5Q13887 457 aaPredicted RBP18.27■□□□□ 0.51
RBFOX2-209ENST00000438146 TRBV7-1A0A0A6YYK4 115 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 CEBPZOSA8MTT3 80 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 OR2C1O95371 312 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 TCRBP04435 133 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 CLEC3BP05452 202 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 HOXB5P09067 269 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 IFITM3Q01628 133 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 DHRS2Q13268 280 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 SMCO1Q147U7 214 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 AARDQ4LEZ3 155 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 C11orf87Q6NUJ2 197 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 ZNF114Q8NC26 417 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 OR1L6Q8NGR2 347 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 ZNF502Q8TBZ5 544 aa18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 PINX1Q96BK5 328 aaKnown RBP18.26■□□□□ 0.51
RBFOX2-209ENST00000438146 K7EIM0 57 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 IGHV3-48P01763 117 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 LYG2Q86SG7 212 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 LRTM2Q8N967 370 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 OR52E5Q8NH55 327 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 OR1S1Q8NH92 325 aa18.25■□□□□ 0.51
RBFOX2-209ENST00000438146 VN1R17PQ8TDU5 208 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms