RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DNAJC9-AS1A6NH13 148 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 C15orf62A8K5M9 175 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 IGHG2P01859 326 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 AREGP15514 252 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 NPY1RP25929 384 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 SULT1A1P50225 295 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 BLCAPP62952 87 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 BAXQ07812 192 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 C9orf152Q5JTZ5 239 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 KCNRGQ8N5I3 272 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 PARP11Q9NR21 331 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 HSPB11Q9Y547 144 aa18.17■□□□□ 0.5
CPSF4-204ENST00000436336 ATP6V0E1O15342 81 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 METTL15P1P0C7V9 234 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 APELAP0DMC3 54 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 RNASE2P10153 161 aaKnown RBP18.16■□□□□ 0.5
CPSF4-204ENST00000436336 EGR2P11161 476 aaPredicted RBP18.16■□□□□ 0.5
CPSF4-204ENST00000436336 RAB11AP62491 216 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 TMEM267Q0VDI3 215 aaPredicted RBP18.16■□□□□ 0.5
CPSF4-204ENST00000436336 C2orf83Q53S99 150 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 ZNF114Q8NC26 417 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 DUX5Q96PT3 197 aa18.16■□□□□ 0.5
CPSF4-204ENST00000436336 PAIP2BQ9ULR5 123 aaKnown RBP18.16■□□□□ 0.5
CPSF4-204ENST00000436336 CLDN34H7C241 214 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 SCAF4O95104 1147 aaKnown RBP18.15■□□□□ 0.5
CPSF4-204ENST00000436336 SUB1P53999 127 aaKnown RBP eCLIP18.15■□□□□ 0.55e-6■■■■■ 28.3
CPSF4-204ENST00000436336 NHLH2Q02577 135 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 TMEM170AQ8WVE7 144 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 LINC01548A6NM66 108 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 CST7O76096 145 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 REG1AP05451 166 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 OR8U8P0C7N1 319 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 FAM157CP0CG43 387 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 ASPHD1Q5U4P2 390 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 TMUB2Q71RG4 321 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 SLC35E3Q7Z769 313 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 LFNGQ8NES3 379 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 TMEM68Q96MH6 324 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 P2RX4Q99571 388 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 NPFFR1Q9GZQ6 430 aa18.15■□□□□ 0.5
CPSF4-204ENST00000436336 PMS2P5A8MQ11 134 aa18.14■□□□□ 0.49
CPSF4-204ENST00000436336 S100A11P31949 105 aa18.14■□□□□ 0.49
CPSF4-204ENST00000436336 CRIP2P52943 208 aaPredicted RBP18.14■□□□□ 0.49
CPSF4-204ENST00000436336 ARL6Q9H0F7 186 aa18.14■□□□□ 0.49
CPSF4-204ENST00000436336 ESM1Q9NQ30 184 aa18.14■□□□□ 0.49
CPSF4-204ENST00000436336 F8P00451 2351 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 NPIPB5A8MRT5 1133 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 CRLF1O75462 422 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 CTRB1P17538 263 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 HILS1P60008 231 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 CTRB2Q6GPI1 263 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 TTC9CQ8N5M4 171 aa18.13■□□□□ 0.49
CPSF4-204ENST00000436336 IGF1P05019 195 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 CRYGCP07315 174 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 C4BPBP20851 252 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 AKIRIN2Q53H80 203 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 ETV3LQ6ZN32 361 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 STPG2Q8N412 459 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 PRSS22Q9GZN4 317 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 F11RQ9Y624 299 aaKnown RBP18.12■□□□□ 0.49
CPSF4-204ENST00000436336 TRIM77I1YAP6 450 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 IFNA4P05014 189 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 HBG1P69891 147 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 HBG2P69892 147 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 OR8G2PQ6IF36 304 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 UNQ5815/PRO19632Q6UWF5 114 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 Q6ZS46 218 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 HAPLN4Q86UW8 402 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 TMEM217Q8N7C4 229 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 OR10P1Q8NGE3 313 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 OR1P1Q8NH06 330 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 BSCL2Q96G97 398 aaPredicted RBP18.12■□□□□ 0.49
CPSF4-204ENST00000436336 JMJD8Q96S16 334 aa18.12■□□□□ 0.49
CPSF4-204ENST00000436336 MTORP42345 2549 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 KANTRA0A1W2PQU2 76 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 ARL16Q0P5N6 197 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 ECSCRQ19T08 205 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 OR1S2Q8NGQ3 325 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 OR5C1Q8NGR4 320 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 ARPC5LQ9BPX5 153 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 WNT10AQ9GZT5 417 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 FBXL17Q9UF56 701 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 BOLA1Q9Y3E2 137 aa18.11■□□□□ 0.49
CPSF4-204ENST00000436336 NSD1Q96L73 2696 aaPredicted RBP18.11■□□□□ 0.49
CPSF4-204ENST00000436336 AP4M1O00189 453 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 TAAR5O14804 337 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 BCL2L11O43521 198 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 FBXO24O75426 580 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 PVRIGQ6DKI7 326 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 OR1L6Q8NGR2 347 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 PINX1Q96BK5 328 aaKnown RBP18.1■□□□□ 0.49
CPSF4-204ENST00000436336 ZNF580Q9UK33 172 aa18.1■□□□□ 0.49
CPSF4-204ENST00000436336 RNASE1P07998 156 aaKnown RBP18.09■□□□□ 0.49
CPSF4-204ENST00000436336 OPCMLQ14982 345 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 FAM110DQ8TAY7 271 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-204ENST00000436336 SMIM3Q9BZL3 60 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 TRAV41A0A0B4J266 112 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 PRSS46E5RG02 174 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 DEFA4P12838 97 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 RPL15P61313 204 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms