RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 RPS25P62851 125 aaKnown RBP3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 AADACL3Q5VUY0 350 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 ISOC1Q96CN7 298 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 NKX6-2Q9C056 277 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 OR5AC2Q9NZP5 309 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 ZNF835Q9Y2P0 537 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 RNF11Q9Y3C5 154 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 EML6Q6ZMW3 1958 aa3.59□□□□□ -1.83
HMGB3P10-201ENST00000434734 CRB1P82279 1406 aa3.59□□□□□ -1.84
HMGB3P10-201ENST00000434734 MRC2Q9UBG0 1479 aa3.59□□□□□ -1.84
HMGB3P10-201ENST00000434734 PHLPP1O60346 1717 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 IGHV3-21A0A0B4J1V1 117 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 A0A1W2PP18 115 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 TMEM223A0PJW6 202 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 M0R378 163 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 LYZL6O75951 148 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BOP23527 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BBP33778 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 CXCL12P48061 93 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 NUDT2P50583 147 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 WNT4P56705 351 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BDP58876 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 TAS2R45P59539 299 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BCP62807 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 SELENOWP63302 87 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 CCL20P78556 96 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 EIF3IQ13347 325 aaKnown RBP3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST2H2BEQ16778 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 RPS4Y2Q8TD47 263 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BHQ93079 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 ARL11Q969Q4 196 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BNQ99877 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 HIST1H2BMQ99879 126 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 PRADC1Q9BSG0 188 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 C1QTNF6Q9BXI9 259 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 YIPF3Q9GZM5 350 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 NAT8Q9UHE5 227 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 SMG6Q86US8 1419 aaKnown RBP3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 LTBP1Q14766 1721 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 FER1L6Q2WGJ9 1857 aa3.58□□□□□ -1.84
HMGB3P10-201ENST00000434734 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 A6NED7 52 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 A8MWP4 228 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 UBE2L6O14933 153 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 PRM2P04554 102 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 AZU1P20160 251 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 CASP1P29466 404 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 RBP2P50120 134 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 RAB5CP51148 216 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 CRIP2P52943 208 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 NCS1P62166 190 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 GNB2P62879 340 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 PRDM2Q13029 1718 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 ZNF638Q14966 1978 aaKnown RBP3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 MSMO1Q15800 293 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 OCIAD2Q56VL3 154 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 RNASE10Q5GAN6 216 aaKnown RBP3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 TMEM244Q5VVB8 128 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 DEFB128Q7Z7B8 93 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 CROCCP2Q86T23 111 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 ABCA7Q8IZY2 2146 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 ZFAND2AQ8N6M9 145 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 RMI2Q96E14 147 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 NARS2Q96I59 477 aaKnown RBP3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 NRTNQ99748 197 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 DERL1Q9BUN8 251 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 GABARAPL1Q9H0R8 117 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 IL36BQ9NZH7 164 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 CKLFQ9UBR5 152 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 FUT9Q9Y231 359 aa3.57□□□□□ -1.84
HMGB3P10-201ENST00000434734 NALCNQ8IZF0 1738 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 A2MP01023 1474 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 TNS3Q68CZ2 1445 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 A0A087WYN8 130 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 TRAV38-1A0A0B4J264 116 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 IGHV1-3A0A0C4DH29 117 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 A0A0D9SEW6 157 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 TLCD2A6NGC4 264 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 F6UZH7 168 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 LY6LH3BQJ8 138 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 K7ERS5 55 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 RBFOX2O43251 390 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 DPM2O94777 84 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 IGKV1D-33P01593 117 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 IGKV1-33P01594 117 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 UCHL1P09936 223 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 PSMB8P28062 276 aa3.56□□□□□ -1.84
HMGB3P10-201ENST00000434734 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 1196.8 ms