RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RPL18Q07020 188 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SLC38A11Q08AI6 406 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 MOGQ16653 247 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 MIAQ16674 131 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST2H2BEQ16778 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 C12orf74Q32Q52 190 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 ARHGAP11BQ3KRB8 267 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 AKIRIN2Q53H80 203 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HCP5Q6MZN7 132 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 DHRS4L2Q6PKH6 230 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 LYZL1Q6UWQ5 148 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 LHFPL1Q86WI0 220 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SMIM20Q8N5G0 67 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 GDPD1Q8N9F7 314 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 MCFD2Q8NI22 146 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 MRPL30Q8TCC3 161 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 H1FXQ92522 213 aaKnown RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BHQ93079 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BNQ99877 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H2BMQ99879 126 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 SELENOSQ9BQE4 189 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 CCDC90BQ9GZT6 254 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 NMNAT1Q9HAN9 279 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-205ENST00000433888 ARMC1Q9NVT9 282 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 TIMM9Q9Y5J7 89 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 ARL5AQ9Y689 179 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM56-RWDD3S4R434 201 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 PTPRBP23467 1997 aa1.25□□□□□ -2.21
PTPN4-205ENST00000433888 PIK3C2GO75747 1445 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 COL11A1P12107 1806 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 TMSB15BA0A087X1C1 80 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 TRGV5A0A0B4J1U4 118 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 BUB1B-PAK6H3BSN5 160 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 J3QQQ9 107 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 CREBL2O60519 120 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 CIAO1O76071 339 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF682O95780 498 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 SULT1A3P0DMM9 295 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 SULT1A4P0DMN0 295 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 P0DMU3 169 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 FAM231AP0DMU4 169 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 FAM231CP0DMU5 169 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 CRYGAP11844 174 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 CYBAP13498 195 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 ERP29P30040 261 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 TPI1P60174 286 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 RPL26P61254 145 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 ARF6P62330 175 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 GNG5P63218 68 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 HIST1H3AP68431 136 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 CCL20P78556 96 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 ERHP84090 104 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 H3F3AP84243 136 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 TNFRSF9Q07011 255 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 RHEBQ15382 184 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 SS18Q15532 418 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 SNCBQ16143 134 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 IAH1Q2TAA2 248 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF791Q3KP31 576 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 FAM27BQ5VT28 67 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM42Q69YG0 159 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 STX12Q86Y82 276 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 EXOC3-AS1Q8N2X6 119 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 VCX3BQ9H321 246 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 MRPL40Q9NQ50 206 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 IL20Q9NYY1 176 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 RSL24D1Q9UHA3 163 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 RPL26L1Q9UNX3 145 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 HHLA3Q9XRX5 114 aa1.24□□□□□ -2.21
PTPN4-205ENST00000433888 SAMHD1Q9Y3Z3 626 aaKnown RBP1.24□□□□□ -2.21
PTPN4-205ENST00000433888 KIF24Q5T7B8 1368 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 MYH11P35749 1972 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TTC21AQ8NDW8 1320 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 REREQ9P2R6 1566 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TRAV7A0A075B6U4 112 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 MUC21A0A0G2JKD1 596 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 A0A0J9YW62 118 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 MUC21A0A140T8X8 626 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TRAPPC13A5PLN9 417 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM235A6NFC5 223 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 FABP5P3A8MUU1 101 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 H7C2G1 150 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 PIAS1O75925 651 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 IGHV3-7P01780 117 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 C8GP07360 202 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 SMIM10L2AP0DMW4 78 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 SMIM10L2BP0DMW5 78 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 ALDH3A1P30838 453 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 ATP5G3P48201 142 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 CRYBA4P53673 196 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 AP1S1P61966 158 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 KRR1Q13601 381 aaKnown RBP1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TMEM155Q4W5P6 130 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 C9orf64Q5T6V5 341 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 GOLT1AQ6ZVE7 132 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 OOSP2Q86WS3 158 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 OR5J2Q8NH18 312 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 STAG3L4Q8TBR4 150 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 WFDC5Q8TCV5 224 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms