RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TRAV4A0A0B4J268 109 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 IGHV3OR16-9A0A0B4J2B5 98 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 PGPA6NDG6 321 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 C4orf51C9J302 202 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 GABARAPH6UMI1 98 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 OVOL1O14753 267 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 MYL12BO14950 172 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 MRPS14O60783 128 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 IGHG2P01859 326 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 MAS1P04201 325 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 GYPCP04921 128 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 CRYBA1P05813 215 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ADRA2AP08913 450 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SCTP09683 121 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 IGLC6P0CF74 106 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ERGP11308 486 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF14P17017 642 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 FKBP2P26885 142 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 GABRA3P34903 492 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 CXCL5P42830 114 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF140P52738 457 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 TAS2R20P59543 309 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 C1QTNF8P60827 252 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 RBMY1FQ15415 496 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF141Q15928 474 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TMEM183BQ1AE95 376 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 Q499Y3 187 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 BCL2L15Q5TBC7 163 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 FKBP1CQ5VVH2 108 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 HMGN2P46Q86SG4 172 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TMEM183AQ8IXX5 376 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SLC22A24Q8N4F4 322 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 YIPF7Q8N8F6 280 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZIC4Q8N9L1 334 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 OR11G2Q8NGC1 345 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 OR8S1Q8NH09 359 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SLAMF6Q96DU3 332 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 MALSU1Q96EH3 234 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 NEURL3Q96EH8 262 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TMEM70Q9BUB7 260 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 GABARAPL3Q9BY60 117 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SAMD10Q9BYL1 202 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 PBOV1Q9GZY1 135 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 C11orf68Q9H3H3 251 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 Q9H521 79 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 AMMECR1Q9Y4X0 333 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 PCYT1BQ9Y5K3 369 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 HEBP2Q9Y5Z4 205 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SLC25A15Q9Y619 301 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ABCA3Q99758 1704 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SMARCA4P51532 1647 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 GRIN2AQ12879 1464 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 PRG4Q92954 1404 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 TONSLQ96HA7 1378 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TRAV5A0A0B4J249 113 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 LOC389332A0A1B0GUA5 103 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TRDV1A0A1B0GX56 115 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 TMEM212A6NML5 194 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 OR4C45A6NMZ5 311 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 IFITM5A6NNB3 132 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 C1orf196B1AJZ1 125 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 LY6LH3BQJ8 138 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 CCDC179H3BU77 68 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 AIPO00170 330 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 PIRO00625 290 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 UBFD1O14562 309 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 NPFFO15130 113 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 OR12D1P0DN82 309 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 POLR2IP36954 125 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 UBE2AP49459 152 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 GNG4P50150 75 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 HERVK_113P63121 156 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 BTG2P78543 158 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 RHOGP84095 191 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 FABP9Q0Z7S8 132 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ERCC8Q13216 396 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF404Q494X3 552 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 NXNL2Q5VZ03 156 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 SLC35E3Q7Z769 313 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 LHFPL1Q86WI0 220 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 Q8N976 141 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 OR5A2Q8NGI9 324 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF420Q8TAQ5 688 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 GEMIN6Q8WXD5 167 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 PP6455Q8WZ26 134 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 C18orf15Q96N68 181 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 THTPAQ9BU02 230 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ZNF629Q9UEG4 869 aaPredicted RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 MCTS1Q9ULC4 181 aaKnown RBP1.74□□□□□ -2.13
CLK1-204ENST00000432425 POMPQ9Y244 141 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ENPP4Q9Y6X5 453 aa1.74□□□□□ -2.13
CLK1-204ENST00000432425 ALPK3Q96L96 1907 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 ADGBQ8N7X0 1667 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 BCL9LQ86UU0 1499 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 CARMIL3Q8ND23 1372 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 BRWD3Q6RI45 1802 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 A0A0B4J2A0 478 aa1.73□□□□□ -2.13
CLK1-204ENST00000432425 IGHV1-69DA0A0B4J2H0 117 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms