RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OCMP0CE72 109 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 HIST1H1CP16403 213 aaKnown RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF708P17019 499 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 TPI1P60174 286 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 BCL2A1Q16548 175 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 DEFB134Q4QY38 66 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 CENPWQ5EE01 88 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 PLEKHG7Q6ZR37 379 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 Q6ZRU5 148 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 LRP11Q86VZ4 500 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 RIBC1Q8N443 379 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZFAND2AQ8N6M9 145 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR5D18Q8NGL1 313 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR5K1Q8NHB7 308 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNRF2Q8NHG8 242 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 RAD51AP1Q96B01 352 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 DCUN1D1Q96GG9 259 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 SELENOSQ9BQE4 189 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 ABCG5Q9H222 651 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 TRABDQ9H4I3 376 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF391Q9UJN7 358 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 DNAJC12Q9UKB3 198 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 PSMD13Q9UNM6 376 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 PHLDA3Q9Y5J5 127 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 FAM215AQ9Y5M1 114 aa1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 CHD3Q12873 2000 aaKnown RBP1.49□□□□□ -2.17
HMGB1P27-201ENST00000431429 TCHHQ07283 1943 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 UQCRHLA0A096LP55 91 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGKV2-24A0A0C4DH68 120 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 DEFB108AA8MXU0 73 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 UGT2B7P16662 529 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 PVALBP20472 110 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 CD79BP40259 229 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 GABRA4P48169 554 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 CLDN12P56749 244 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR4D2P58180 307 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 RELAQ04206 551 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 BAMBIQ13145 260 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR8G1Q15617 311 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF141Q15928 474 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 TAF9Q16594 264 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 CCDC122Q5T0U0 273 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 HCP5Q6MZN7 132 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 EBLN2Q6P2I7 272 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 FAM19A5Q7Z5A7 132 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 IQCF2Q8IXL9 164 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 PLPP5Q8NEB5 264 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 CD200R1Q8TD46 325 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 GALMQ96C23 342 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 PPCDCQ96CD2 204 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 RBP7Q96R05 134 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 EBNA1BP2Q99848 306 aaKnown RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 C7orf50Q9BRJ6 194 aaKnown RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 C1QTNF6Q9BXI9 259 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 TTTY12Q9BZ98 90 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 DRC3Q9H069 523 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 ARL6Q9H0F7 186 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 HDHD2Q9H0R4 259 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 GTSF1LQ9H1H1 148 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 LRRC19Q9H756 370 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 TMEM216Q9P0N5 145 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 BOKQ9UMX3 212 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 PCYT1BQ9Y5K3 369 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 SNX10Q9Y5X0 201 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 AKAP6Q13023 2319 aa1.48□□□□□ -2.17
HMGB1P27-201ENST00000431429 MDC1Q14676 2089 aaKnown RBP1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 NCOA6Q14686 2063 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGLV10-54A0A075B6I4 117 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 A0A1W2PNM2 257 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 A6NED7 52 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 B4DSR2 109 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 ATP8B1O43520 1251 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 NSA2O95478 260 aaKnown RBP1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 CRYBA1P05813 215 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 PRPS1L1P21108 318 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 GADD45AP24522 165 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 CMPK1P30085 196 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 RCVRNP35243 200 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 FUSP35637 526 aaKnown RBP eCLIP1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 COILP38432 576 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 PPP1R2P41236 205 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 EFNA4P52798 201 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 MED21Q13503 144 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 HLA-DRB5Q30154 266 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 DEFB110Q30KQ9 67 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 SPATA31B1PQ5VZV4 182 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 PPP1R2P3Q6NXS1 205 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 DNM1P34Q6PK57 102 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TCF24Q7RTU0 167 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TCF23Q7RTU1 214 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 SCXQ7RTU7 201 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 CALHM3Q86XJ0 350 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 FUNDC1Q8IVP5 155 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TMEM251Q8N6I4 163 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 TMEM75Q8N9X5 138 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 ATP6V1C2Q8NEY4 427 aa1.47□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR51H1Q8NH63 302 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms