RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 HSD17B13Q7Z5P4 300 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-206ENST00000431390 OR10W1Q8NGF6 305 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 SRSF12Q8WXF0 261 aaKnown RBP14.47□□□□□ -0.09
HMGN1-206ENST00000431390 BSCL2Q96G97 398 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-206ENST00000431390 RASL11BQ9BPW5 248 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 CYTL1Q9NRR1 136 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 PLXNB1O43157 2135 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 MDFIC2A0A1B0GVS7 189 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 PMS2P5A8MQ11 134 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 CNIH1O95406 144 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 FAM157CP0CG43 387 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 NPY1RP25929 384 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 RAB11AP62491 216 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 C16orf82Q7Z2V1 217 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 OR1S2Q8NGQ3 325 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 OR5C1Q8NGR4 320 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 ZNF471Q9BX82 626 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-206ENST00000431390 SMIM3Q9BZL3 60 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 PRDM13Q9H4Q3 707 aa14.47□□□□□ -0.09
HMGN1-206ENST00000431390 IGLC7A0M8Q6 106 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 TEX22C9J3V5 150 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 OR8U8P0C7N1 319 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 UBA52P62987 128 aaKnown RBP14.46□□□□□ -0.09
HMGN1-206ENST00000431390 IFITM2Q01629 132 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 WT1-ASQ06250 92 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 FXYD3Q14802 87 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 HAPLN4Q86UW8 402 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 TMEM217Q8N7C4 229 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 C5orf56Q8N8D9 126 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 STOML3Q8TAV4 291 aa14.46□□□□□ -0.09
HMGN1-206ENST00000431390 PAIP2BQ9ULR5 123 aaKnown RBP14.46□□□□□ -0.09
HMGN1-206ENST00000431390 SVEP1Q4LDE5 3571 aa14.46□□□□□ -0.1
HMGN1-206ENST00000431390 DFFBO76075 338 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 JTBO76095 146 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 SNCAP37840 140 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 EIF5AP63241 154 aaKnown RBP14.45□□□□□ -0.1
HMGN1-206ENST00000431390 CX3CL1P78423 397 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 KRTAP24-1Q3LI83 254 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 C2orf83Q53S99 150 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 TMEM219Q86XT9 240 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 OR10P1Q8NGE3 313 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 OR5R1Q8NH85 324 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 TMEM170AQ8WVE7 144 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 C22orf15Q8WYQ4 148 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 PINX1Q96BK5 328 aaKnown RBP14.45□□□□□ -0.1
HMGN1-206ENST00000431390 TMEM160Q9NX00 188 aa14.45□□□□□ -0.1
HMGN1-206ENST00000431390 BORCS7-ASMTA0A0B4J1R7 106 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 M0QZK8 103 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 OR13C7P0DN81 318 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 RNASE2P10153 161 aaKnown RBP14.44□□□□□ -0.1
HMGN1-206ENST00000431390 IER3P46695 156 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 ARL16Q0P5N6 197 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 ZNF266Q14584 549 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 OR8G2PQ6IF36 304 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 Q6YL49 198 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 ZNF114Q8NC26 417 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 ARPC1AQ92747 370 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 WFDC1Q9HC57 220 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 CDC42EP3Q9UKI2 254 aa14.44□□□□□ -0.1
HMGN1-206ENST00000431390 IGHV7-81A0A0B4J1V7 117 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 HNF1AP20823 631 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 SUB1P53999 127 aaKnown RBP eCLIP14.43□□□□□ -0.15e-59■■■■■ 41.6
HMGN1-206ENST00000431390 SLC38A11Q08AI6 406 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 CLINT1Q14677 625 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 LY6EQ16553 131 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 ATP6V1FQ16864 119 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 TUSC1Q2TAM9 212 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 RPL7L1Q6DKI1 246 aaKnown RBP14.43□□□□□ -0.1
HMGN1-206ENST00000431390 TEX261Q6UWH6 196 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 ETV3LQ6ZN32 361 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 UBAC2Q8NBM4 344 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 ST8SIA2Q92186 375 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 ZNF48Q96MX3 618 aaPredicted RBP14.43□□□□□ -0.1
HMGN1-206ENST00000431390 ATP5SQ99766 215 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 BTBD17A6NE02 478 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 TPT1P13693 172 aaKnown RBP14.43□□□□□ -0.1
HMGN1-206ENST00000431390 SRP14P37108 136 aaKnown RBP14.43□□□□□ -0.1
HMGN1-206ENST00000431390 LILRB2Q8N423 598 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 SSMEM1Q8WWF3 244 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 GGACTQ9BVM4 153 aa14.43□□□□□ -0.1
HMGN1-206ENST00000431390 PRSS46E5RG02 174 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 RGS13O14921 159 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 IGHV4-59P01825 116 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 IFNA4P05014 189 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 BAP18Q8IXM2 172 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 P2RX4Q99571 388 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 NBEAL1Q6ZS30 2694 aa14.42□□□□□ -0.1
HMGN1-206ENST00000431390 AMY1AP04745 511 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 AREGP15514 252 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 NDPQ00604 133 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 SRSF2Q01130 221 aaKnown RBP14.41□□□□□ -0.1
HMGN1-206ENST00000431390 IL17RELQ6ZVW7 336 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 ABHD5Q8WTS1 349 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 PHYHIPLQ96FC7 376 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 ARV1Q9H2C2 271 aa14.41□□□□□ -0.1
HMGN1-206ENST00000431390 HAX1O00165 279 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 CFDP00746 253 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-206ENST00000431390 IFNA7P01567 189 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 DLK1P80370 383 aa14.4□□□□□ -0.1
HMGN1-206ENST00000431390 VWC2Q2TAL6 325 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms