RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 LINC00596Q86U02 117 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TCTEX1D1Q8N7M0 179 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 MINDY2Q8NBR6 621 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 PXT1Q8NFP0 134 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 OR8J1Q8NGP2 316 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 MYOZ3Q8TDC0 251 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 NEK7Q8TDX7 302 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TNFAIP8L1Q8WVP5 186 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 CANT1Q8WVQ1 401 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 ARPC1AQ92747 370 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TMEM80Q96HE8 168 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 HSPB9Q9BQS6 159 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 THTPAQ9BU02 230 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TMED9Q9BVK6 235 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TOLLIPQ9H0E2 274 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 CST11Q9H112 138 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 METTL9Q9H1A3 318 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 RIBC2Q9H4K1 309 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 EDA2RQ9HAV5 297 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 SPACA1Q9HBV2 294 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 PARP11Q9NR21 331 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 KCNIP1Q9NZI2 227 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 TRAPPC2LQ9UL33 140 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 ING4Q9UNL4 249 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 ST3GAL6Q9Y274 331 aa2.53□□□□□ -2
PTPN4-204ENST00000431283 CSMD3Q7Z407 3707 aa2.53□□□□□ -2.01
PTPN4-204ENST00000431283 SORL1Q92673 2214 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 IGHV3-43A0A0B4J1X8 118 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TRAV39A0A0B4J263 110 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 A0A0G2JLM5 398 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TMEM212A6NML5 194 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ZNF736B4DX44 427 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 C12orf77C9JDV5 145 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 MCRIP1C9JLW8 97 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 J3QLW9 94 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 M0R129 80 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 LANCL1O43813 399 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 CNIH1O95406 144 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 HLA-DRB1P01911 266 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 CD2P06729 351 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 LGALS1P09382 135 aaKnown RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 IGHV3-43DP0DP04 118 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 GTF2F2P13984 249 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 CTRLP40313 264 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 RPL29P47914 159 aaKnown RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TPPP2P59282 170 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ACTBP60709 375 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 PPP3R1P63098 170 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 RAB40BQ12829 278 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 MRPL28Q13084 256 aaKnown RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 FLOT2Q14254 428 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 GPR176Q14439 515 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ZSCAN26Q16670 478 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 C5orf64Q2M2E5 130 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 MPV17LQ2QL34 196 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 PIGYQ3MUY2 71 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ACTBL2Q562R1 376 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 SYT6Q5T7P8 510 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 LPCAT4Q643R3 524 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 C12orf73Q69YU5 71 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ZNF660Q6AZW8 331 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 LCN12Q6JVE5 192 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ACBD7Q8N6N7 88 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TMEM104Q8NE00 496 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 OR51A4Q8NGJ6 313 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 OR52N1Q8NH53 320 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 OR5AK2Q8NH90 309 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 PLPPR1Q8TBJ4 325 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TSEN15Q8WW01 171 aaKnown RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ANKRD60Q9BZ19 345 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ALX4Q9H161 411 aaPredicted RBP2.52□□□□□ -2.01
PTPN4-204ENST00000431283 TMEM138Q9NPI0 162 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 OR2S2Q9NQN1 319 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 ZNF355PQ9NSJ1 428 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 CKLFQ9UBR5 152 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 LRRC42Q9Y546 428 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 RYR1P21817 5038 aa2.52□□□□□ -2.01
PTPN4-204ENST00000431283 PLECQ15149 4684 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 RBMY1BA6NDE4 496 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 RBMY1EA6NEQ0 496 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 OR4C45A6NMZ5 311 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 C15orf65H3BRN8 121 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 GEMIN2O14893 280 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 SLC22A1O15245 554 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 GYG2O15488 501 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 RBBP9O75884 186 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 CDRT1O95170 752 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 FADS2O95864 444 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 LY6G6CO95867 125 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 IGHV3-11P01762 117 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 HBZP02008 142 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 MT-ND4P03905 459 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 TRGV3P03979 118 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 CD5P06127 495 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 RBMY1DP0C7P1 496 aaKnown RBP2.51□□□□□ -2.01
PTPN4-204ENST00000431283 TBPP20226 339 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 SERPINA2P20848 420 aa2.51□□□□□ -2.01
PTPN4-204ENST00000431283 BLVRBP30043 206 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms