RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 XRCC3O43542 346 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 CTSGP08311 255 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 FCGR2BP31994 310 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 DGCR14Q96DF8 476 aaKnown RBP13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 C20orf24Q9BUV8 137 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 IFT46Q9NQC8 304 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 TMEM14BQ9NUH8 114 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 SMPXQ9UHP9 88 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 NSG2Q9Y328 171 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 OR51B2Q9Y5P1 312 aa13.72□□□□□ -0.21
AC004540.1-202ENST00000430548 LOC100506127A0A0U1RQW1 187 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 DBX1A6NMT0 343 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 C15orf61A6NNL5 157 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 RPL35AP18077 110 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 NAT1P18440 290 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 RPP25LQ8N5L8 163 aaKnown RBP13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 RNF2Q99496 336 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
AC004540.1-202ENST00000430548 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 CHEK1O14757 476 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 KRASP01116 189 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 G6PCP35575 357 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 LPAR6P43657 344 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 RFX2P48378 723 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 Q56UQ5 140 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 LGALS9CQ6DKI2 356 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 UBAC2Q8NBM4 344 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 GATAD1Q8WUU5 269 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 PHLDA1Q8WV24 401 aaPredicted RBP13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 C11orf68Q9H3H3 251 aaKnown RBP13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 VPS13DQ5THJ4 4388 aa13.7□□□□□ -0.22
AC004540.1-202ENST00000430548 I3L2K1 104 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 GPR31O00270 319 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 TAS2R46P59540 309 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 RELQ04864 619 aaPredicted RBP13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 APRG1Q8IVJ8 170 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 CMTM1Q8IZ96 169 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 TSC22D3Q99576 134 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 C6orf62Q9GZU0 229 aaPredicted RBP13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 FKBP11Q9NYL4 201 aa13.69□□□□□ -0.22
AC004540.1-202ENST00000430548 SNAPC5O75971 98 aa13.68□□□□□ -0.22
AC004540.1-202ENST00000430548 ZNF124Q15973 351 aa13.68□□□□□ -0.22
AC004540.1-202ENST00000430548 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
AC004540.1-202ENST00000430548 KRTAP17-1Q9BYP8 105 aa13.68□□□□□ -0.22
AC004540.1-202ENST00000430548 Q9H521 79 aa13.68□□□□□ -0.22
AC004540.1-202ENST00000430548 NUPL2O15504 423 aaKnown RBP13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 PMP2P02689 132 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 TAS2R20P59543 309 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 CROCCP3Q8IVE0 287 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 OR5H2Q8NGV7 314 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 TXN2Q99757 166 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 NXF2Q9GZY0 626 aaKnown RBP13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
AC004540.1-202ENST00000430548 MPTX1A8MV57 137 aa13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 DEDDO75618 318 aa13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 CMC4P56277 68 aaPredicted RBP13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 TSPAN14Q8NG11 270 aa13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
AC004540.1-202ENST00000430548 ATP6V1G2O95670 118 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 IGKV1-39P01597 117 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 IGKV1D-39P04432 117 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 HRH1P35367 487 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 TGFBR1P36897 503 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 MFAP4P55083 255 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 PRCDQ00LT1 54 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 NEDD8Q15843 81 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 RARRES2Q99969 163 aa13.65□□□□□ -0.22
AC004540.1-202ENST00000430548 MT-CO2P00403 227 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 KCTD21Q4G0X4 260 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 OR6F1Q8NGZ6 308 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 MISP3Q96FF7 219 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 MFFQ9GZY8 342 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
AC004540.1-202ENST00000430548 IGHV3-49A0A0A0MS15 119 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 CD5P06127 495 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 PHLDA2Q53GA4 152 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 SAMD12Q8N8I0 201 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 GPX8Q8TED1 209 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 ZFAND3Q9H8U3 227 aa13.63□□□□□ -0.23
AC004540.1-202ENST00000430548 AGRNO00468 2067 aa13.62□□□□□ -0.23
AC004540.1-202ENST00000430548 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
AC004540.1-202ENST00000430548 YIF1AO95070 293 aa13.62□□□□□ -0.23
AC004540.1-202ENST00000430548 PRSS3P35030 304 aa13.62□□□□□ -0.23
AC004540.1-202ENST00000430548 RPS19P39019 145 aaKnown RBP13.62□□□□□ -0.23
AC004540.1-202ENST00000430548 TFPI2P48307 235 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms