RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 OR1F12Q8NHA8 337 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 G3V4G9 280 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 B4GALT1P15291 398 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 PEBP1P30086 187 aaKnown RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 FOXF1Q12946 379 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 MOGAT3Q86VF5 341 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 AURKAIP1Q9NWT8 199 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ANAPC10Q9UM13 185 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM213A2RRL7 107 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 MLNRO43193 412 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 OR2J3O76001 311 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 GNG3P63215 75 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ID3Q02535 119 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ZNF816Q0VGE8 651 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 MST1LQ2TV78 715 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 PPIAL4DF5H284 164 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 LAMTOR5O43504 91 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 TNFSF14O43557 240 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 COX8AP10176 69 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 DSCR4P56555 118 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 RHBDD2Q6NTF9 364 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ORMDL3Q8N138 153 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 WNT2BQ93097 391 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 SETD2Q9BYW2 2564 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 UBALD2Q8IYN6 164 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ATP23Q9Y6H3 246 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 SHISA8B8ZZ34 492 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 HBDP02042 147 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 FAM231DQ6ZW35 169 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 RPRMLQ8N4K4 120 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 C5orf42Q9H799 3197 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 IGHV5-51A0A0C4DH38 117 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 SFTPA2Q8IWL1 248 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 GDF9O60383 454 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 CD46P15529 392 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 CTGFP29279 349 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 BCL6BQ8N143 479 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 ZPLD1Q8TCW7 415 aa6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 AMMECR1Q9Y4X0 333 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-202ENST00000429713 A0A096LPE4 126 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 A0A1W2PPZ6 126 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 LILRA5A6NI73 299 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 NPIPB11E5RHQ5 1161 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 NDUFC2O95298 119 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 H1FXQ92522 213 aaKnown RBP6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 C8orf44Q96CB5 159 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 BPTFQ12830 3046 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 VGLL1Q99990 258 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 RAB1BQ9H0U4 201 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 ALKBH3Q96Q83 286 aaPredicted RBP6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 ZNF735P0CB33 412 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 LILRA6Q6PI73 481 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 FAM222BQ8WU58 562 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 WBP1Q96G27 269 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 WNT2P09544 360 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 CCL1P22362 96 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 NMUP48645 174 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 C18orf12Q96KH6 178 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 DHHO43323 396 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 CELA2BP08218 269 aaPredicted RBP6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 HLA-DRB4P13762 266 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 CXCL12P48061 93 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 DLX1P56177 255 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 TBR1Q16650 682 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM196Q5HYL7 178 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 HLA-DRB4X5D2U9 266 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 TDHQ8IZJ6 230 aa6.41□□□□□ -1.38
SYNPO2-202ENST00000429713 LOC107984156A0A0G2JMH3 177 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 LMO7DNF2Z398 122 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 FNDC7Q5VTL7 733 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 ARL17AQ8IVW1 177 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 FAM60AQ9NP50 221 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 DECR2Q9NUI1 292 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 EDDM3BP56851 147 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 BVES-AS1Q5T3Y7 98 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 RNASE8Q8TDE3 154 aaKnown RBP6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 RELBQ01201 579 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 C22orf46C9J442 243 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 IGKV1D-16P01601 117 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 RBM11P57052 281 aaKnown RBP6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 MPV17L2Q567V2 206 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 SPATA31B1PQ5VZV4 182 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 OR8A1Q8NGG7 326 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 TMEM171Q8WVE6 324 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 SNRNP40Q96DI7 357 aaKnown RBP6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 MMP17Q9ULZ9 603 aa6.4□□□□□ -1.38
SYNPO2-202ENST00000429713 FCGR2BP31994 310 aaPredicted RBP6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 OR5AN1Q8NGI8 311 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 GPR82Q96P67 336 aa6.4□□□□□ -1.39
SYNPO2-202ENST00000429713 RTN4RQ9BZR6 473 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms