RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 NANPQ8TBE9 248 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 TSPAN15O95858 294 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 IFNA17P01571 189 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 CRYBA1P05813 215 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 AREGP15514 252 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 NQO2P16083 231 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 IL3RAP26951 378 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 SRP14P37108 136 aaKnown RBP7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 TNXAQ16473 311 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 MLANAQ16655 118 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 C8orf31Q8N9H6 132 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 ZBTB34Q8NCN2 500 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 MALSU1Q96EH3 234 aa7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 NOL4LQ96MY1 436 aaPredicted RBP7.57□□□□□ -1.2
HMGCLL1-206ENST00000428842 RNF212BA8MTL3 300 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 CA2P00918 260 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 CEACAM3P40198 252 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 NHLH2Q02577 135 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM267Q0VDI3 215 aaPredicted RBP7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 PEA15Q15121 130 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 GUK1Q16774 197 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM217Q8N7C4 229 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 C15orf54Q8N8G6 183 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 BIN3Q9NQY0 253 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 SMCO4Q9NRQ5 59 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 AMMECR1Q9Y4X0 333 aaPredicted RBP7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 FAM24AA6NFZ4 105 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 G3V318 75 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 TXNL1O43396 289 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 CD5LO43866 347 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 CST7O76096 145 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 MOSP00540 346 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 FSHBP01225 129 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 EWSR1Q01844 656 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 RBKSQ9H477 322 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
HMGCLL1-206ENST00000428842 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 KBTBD11O94819 623 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 IL6RP08887 468 aaPredicted RBP7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 CAMLGP49069 296 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM177Q53S58 311 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR4A16Q8NH70 328 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
HMGCLL1-206ENST00000428842 TEX50A0A1B0GTY4 177 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 PITX3O75364 302 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 FBP1P09467 338 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 NKX2-1P43699 371 aaPredicted RBP7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 PPT1P50897 306 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 PAX9P55771 341 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 PDPNQ86YL7 162 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR2C3Q8N628 320 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 Q8N9W7 124 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ABHD5Q8WTS1 349 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 SPIN2AQ99865 258 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 SPIN2BQ9BPZ2 258 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 SLC25A33Q9BSK2 321 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 TUBA4BQ9H853 241 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 COA4Q9NYJ1 87 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR51B2Q9Y5P1 312 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 IGSF23A1L1A6 192 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 RRHO14718 337 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 NBR2O15453 112 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 EIF3GO75821 320 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 IER3P46695 156 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 FHITP49789 147 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ERVK-16P61578 105 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ARL16Q0P5N6 197 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 TMEM30BQ3MIR4 351 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 RNF212Q495C1 297 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 SPANXN5Q5MJ07 72 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 MINOS1Q5TGZ0 78 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 PPP1R27Q86WC6 154 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 TBL2Q9Y4P3 447 aaKnown RBP7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 MINOS1-NBL1R4GNA1 71 aa7.54□□□□□ -1.2
HMGCLL1-206ENST00000428842 CEBPZOSA8MTT3 80 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 UPK2O00526 184 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 IFNA4P05014 189 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 GATA3P23771 443 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 UBE2KP61086 200 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 TNFRSF9Q07011 255 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 ZNF329Q86UD4 541 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 Q8N6K4 173 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 OR5T1Q8NG75 326 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 SSMEM1Q8WWF3 244 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 IL22RA2Q969J5 263 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
HMGCLL1-206ENST00000428842 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms