RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SLC23A3Q6PIS1 610 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 SSBP4Q9BWG4 385 aaPredicted RBP4.25□□□□□ -1.73
RIF1-203ENST00000428287 PROK2Q9HC23 129 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 FAM231BA6NCW3 169 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 HELTA6NFD8 242 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 SRRM4A7MD48 611 aaKnown RBP4.25□□□□□ -1.73
RIF1-203ENST00000428287 P04436 131 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 PMCHP20382 165 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 MGST2Q99735 147 aa4.25□□□□□ -1.73
RIF1-203ENST00000428287 GJE1A6NN92 205 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 PAX2Q02962 417 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 BATFQ16520 125 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 LCNL1Q6ZST4 164 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FGF21Q9NSA1 209 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 LOC102723996A0A087X1L8 192 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 A0A0J9YW62 118 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 OVOL3O00110 214 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 RAB29O14966 203 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FGF6P10767 208 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 PLA2G5P39877 138 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 AMMECR1LQ6DCA0 310 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FAM167A-AS1Q96KT0 104 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 UCN2Q96RP3 112 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 PSG11Q9UQ72 335 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 KLF12Q9Y4X4 402 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FLNAP21333 2647 aaKnown RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 CRYAAP02489 173 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 COX8AP10176 69 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 IAPPP10997 89 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 BCL2L2Q92843 193 aaPredicted RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 BORCS7Q96B45 105 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 HSD17B10Q99714 261 aaKnown RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 MPC1Q9Y5U8 109 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 C2orf72A6NCS6 295 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 HINT1P49773 126 aaPredicted RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 GPM6AP51674 278 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 TFF3Q07654 80 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 RSPO4Q2I0M5 234 aaPredicted RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 KIAA1644Q3SXP7 199 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 SLC25A34Q6PIV7 304 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 RITA1Q96K30 269 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 SLC25A10Q9UBX3 287 aaPredicted RBP4.24□□□□□ -1.73
RIF1-203ENST00000428287 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 A0A1W2PPV4 95 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 GABRG2P18507 467 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 MUC21Q5SSG8 566 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 GDF5OSQ5U4N7 250 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 Q8IYB0 196 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 FAM58AQ8N1B3 248 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 CBY3A6NI87 242 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 GGTLC3B5MD39 225 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 GCHFRP30047 84 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 MFAP2P55001 183 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 HTD2P86397 168 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 PMP22Q01453 160 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 ZNF766Q5HY98 468 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 IMMP1LQ96LU5 166 aa4.24□□□□□ -1.73
RIF1-203ENST00000428287 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 SP1P08047 785 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TIGITQ495A1 244 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PLXDC1Q8IUK5 500 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 OR2T6Q8NHC8 308 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 MEGF9Q9H1U4 602 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 IGKV1OR2-108A0A075B7D4 117 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 A0A1W2PPC4 97 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 HIST1H1AQ02539 215 aaPredicted RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 SMIM21Q3B7S5 101 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 GGNQ86UU5 652 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 BOD1L2Q8IYS8 172 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 LINC00470Q9BZP3 86 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TMEM14BQ9NUH8 114 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 IL36RNQ9UBH0 155 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PPIAL4EA0A075B759 164 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PPIAL4CA0A0B4J2A2 164 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PPIAL4DF5H284 164 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 J3QW42 95 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 FAM87AP0C7U9 286 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PPIAL4FP0DN26 164 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 RPL30P62888 115 aaKnown RBP4.23□□□□□ -1.73
RIF1-203ENST00000428287 PLCXD3Q63HM9 321 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 GTF2H5Q6ZYL4 71 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TMEM167BQ9NRX6 74 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 IGHV1OR21-1A0A087WYE8 117 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 GCSAMLQ5JQS6 135 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 OR2K2Q8NGT1 345 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 OR1L3Q8NH93 324 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 LRRC29Q8WV35 223 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 PIGCQ92535 297 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TMEM45BQ96B21 275 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TRAV38-1A0A0B4J264 116 aa4.23□□□□□ -1.73
RIF1-203ENST00000428287 TRAV34A0A0B4J273 112 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms