RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 IGKV1-39P01597 117 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 HLA-AP01891 365 aaKnown RBP6.98□□□□□ -1.29
SMC1A-203ENST00000428014 IGKV1D-39P04432 117 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 DEFA4P12838 97 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 AREGP15514 252 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 RAB25P57735 213 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 UBE2MP61081 183 aaKnown RBP6.98□□□□□ -1.29
SMC1A-203ENST00000428014 WT1-ASQ06250 92 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 FAM106AQ4KMX7 169 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 PHLDA2Q53GA4 152 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 SPANXN2Q5MJ10 180 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 IL34Q6ZMJ4 242 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 SSX9Q7RTT3 188 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 OR2C3Q8N628 320 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 OR4C16Q8NGL9 310 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 OR13C8Q8NGS7 320 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 ZNF502Q8TBZ5 544 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 RBPMSQ93062 196 aaKnown RBP6.98□□□□□ -1.29
SMC1A-203ENST00000428014 TRIM63Q969Q1 353 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 MRGPRFQ96AM1 343 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 BSCL2Q96G97 398 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-203ENST00000428014 DUX3Q96PT4 197 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 THAP7Q9BT49 309 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-203ENST00000428014 ZC4H2Q9NQZ6 224 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 FBXL7Q9UJT9 491 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 KCNIP3Q9Y2W7 256 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 OR51B2Q9Y5P1 312 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 V9GYH0 126 aa6.98□□□□□ -1.29
SMC1A-203ENST00000428014 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 TEX13DA0A0J9YY54 714 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 WI2-2373I1.2A0A1W2PRP0 233 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 NAP1L6A6NFF2 107 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 HMX3A6NHT5 357 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 CRYM-AS1A6NIL9 109 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 SAP30O75446 220 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 RBMXL2O75526 392 aaKnown RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 LY86O95711 162 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 CD5P06127 495 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 C8orf88P0DMB2 117 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 MYOD1P15172 320 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 PGAM2P15259 253 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 G6PCP35575 357 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 SLURP1P55000 103 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 ERHP84090 104 aaKnown RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 LRTM2Q8N967 370 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 OR4D10Q8NGI6 311 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 OR4A16Q8NH70 328 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 GLYATL2Q8WU03 294 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 S100ZQ8WXG8 99 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 RRNAD1Q96FB5 475 aaKnown RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 OR5B12Q96R08 314 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 GPHA2Q96T91 129 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 FAM110AQ9BQ89 295 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 C7orf50Q9BRJ6 194 aaKnown RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 RTBDNQ9BSG5 229 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 ALX4Q9H161 411 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-203ENST00000428014 C5orf66Q9H5L9 145 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 NAA60Q9H7X0 242 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 PALMDQ9NP74 551 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 SMAD5-AS1Q9Y6J3 95 aa6.97□□□□□ -1.29
SMC1A-203ENST00000428014 TRAV3A0A0B4J244 114 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 A0A0B4J2A0 478 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 K7EMT4 169 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 NDUFA4O00483 81 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 OR2J3O76001 311 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 CSN3P07498 182 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 SLC25A6P12236 298 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 ANXA3P12429 323 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 GP9P14770 177 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 SUB1P53999 127 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMC1A-203ENST00000428014 KLF9Q13886 244 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-203ENST00000428014 BSXQ3C1V8 233 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 TMEM128Q5BJH2 165 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 NOXA1Q86UR1 476 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 SGPP2Q8IWX5 399 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 TOMM5Q8N4H5 51 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 MARCH1Q8TCQ1 289 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 CASTOR1Q8WTX7 329 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 TP53RKQ96S44 253 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-203ENST00000428014 MRPL27Q9P0M9 148 aaKnown RBP6.96□□□□□ -1.3
SMC1A-203ENST00000428014 SHPKQ9UHJ6 478 aa6.96□□□□□ -1.3
SMC1A-203ENST00000428014 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 A0A0B4J293 547 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 K7EIM0 57 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 NDUFB8O95169 186 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 IGKV1-5P01602 117 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 VAMP1P23763 118 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 ARL3P36405 182 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 AKR1C2P52895 323 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 SYNJ2BPP57105 145 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 SPCS3P61009 180 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 ZNF79Q15937 498 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 SCGB2B2Q4G0G5 96 aa6.95□□□□□ -1.3
SMC1A-203ENST00000428014 OR51S1Q8NGJ8 323 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms