RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TAAR3PQ9P1P4 343 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 PILRBQ9UKJ0 227 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 KLF13Q9Y2Y9 288 aaPredicted RBP4.05□□□□□ -1.76
LINC00458-202ENST00000427299 DNAJC13O75165 2243 aa4.05□□□□□ -1.76
LINC00458-202ENST00000427299 DSCAML1Q8TD84 2053 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 CNTRLQ7Z7A1 2325 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TRAV9-1A0A075B6T8 112 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 IGKV1D-13A0A0B4J2D9 117 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 A0A1W2PPE3 182 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 CEBPZOSA8MTT3 80 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 C21orf140B9A014 251 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 F6UZH7 168 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 H3BP45 60 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 CLDN1O95832 211 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 SCTP09683 121 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 IGKV1-13P0DP09 117 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 CCNOP22674 350 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TUBG1P23258 451 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 KIR2DS2P43631 304 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 IDH3GP51553 393 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 NDUFA6P56556 154 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 LCN2P80188 198 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TGFBR3Q03167 851 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ZFP36L1Q07352 338 aaKnown RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ADIRFQ15847 76 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 SSX2Q16385 188 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 IQCJQ1A5X6 159 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 BSXQ3C1V8 233 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 DMRTC1Q5HYR2 192 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 PYY3Q5JQD4 70 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 SLC35E4Q6ICL7 350 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM14EPQ6UXP3 125 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 MRPL52Q86TS9 123 aaKnown RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 VASH2Q86V25 355 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 C1orf174Q8IYL3 243 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF383Q8NA42 475 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 OR2M7Q8NG81 312 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 PLPPR1Q8TBJ4 325 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 RNASEH2CQ8TDP1 164 aaKnown RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 OR5P3Q8WZ94 311 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 RAB1CQ92928 201 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 LHX4Q969G2 390 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 GMPPAQ96IJ6 420 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 RARRES2Q99969 163 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ACTR3CQ9C0K3 210 aaPredicted RBP4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF665Q9H7R5 613 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TUBG2Q9NRH3 451 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 UFSP2Q9NUQ7 469 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TRAPPC2LQ9UL33 140 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 URGCP-MRPS24S4R325 110 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 ARL2-SNX15V9GYD0 113 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 RTTNQ86VV8 2226 aa4.04□□□□□ -1.76
LINC00458-202ENST00000427299 TGIF2-C20orf24A0A0A6YYL0 155 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 A0A0G2JMM0 328 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 A0A1W2PPB8 328 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 A0A1W2PRS3 328 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 KRTAP16-1A8MUX0 517 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 KIR3DP1A8MWS1 328 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 MKRN2OSH3BPM6 223 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 SH2D1BO14796 132 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TNFSF12O43508 249 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF737O75373 536 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 YIF1AO95070 293 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 NXPH2O95156 264 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 MT-CO2P00403 227 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 GCGP01275 180 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TRGC2P03986 189 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TYMSP04818 313 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TRGC1P0CF51 173 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 PGA5P0DJD9 388 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 IAPPP10997 89 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 FABP4P15090 132 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 CEACAM8P31997 349 aaPredicted RBP4.03□□□□□ -1.76
LINC00458-202ENST00000427299 GALR1P47211 349 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 CDC34P49427 236 aaPredicted RBP4.03□□□□□ -1.76
LINC00458-202ENST00000427299 LHX2P50458 406 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 CCL11P51671 97 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 CLDN18P56856 261 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 UBE2NP61088 152 aaKnown RBP4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TNFRSF9Q07011 255 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 ZNF146Q15072 292 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 TMEM241Q24JQ0 296 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 SMIM21Q3B7S5 101 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 COA6Q5JTJ3 125 aaKnown RBP4.03□□□□□ -1.76
LINC00458-202ENST00000427299 SPATA46Q5T0L3 261 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 FAM159AQ6UWV7 190 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 LCN15Q6UWW0 184 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 SSX9Q7RTT3 188 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 NOTCH2NLQ7Z3S9 236 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 GTSCR1Q86UQ5 136 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 STPG4Q8N801 248 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 OR10P1Q8NGE3 313 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 OR10D4PQ8NGN7 298 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 OR1P1Q8NH06 330 aa4.03□□□□□ -1.76
LINC00458-202ENST00000427299 CA5BP1Q8WTZ4 195 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms