RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SIRT7Q9NRC8 400 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 NUDT15Q9NV35 164 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 MCUBQ9NWR8 336 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 PIPOXQ9P0Z9 390 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 DPM3Q9P2X0 92 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 TBL2Q9Y4P3 447 aaKnown RBP4.27□□□□□ -1.73
C9orf3-205ENST00000427193 AUP1Q9Y679 476 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 MINOS1-NBL1R4GNA1 71 aa4.27□□□□□ -1.73
C9orf3-205ENST00000427193 IGHV1-69DA0A0B4J2H0 117 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 A0A1W2PPE3 182 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 C9orf170A2RU37 121 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PGPEP1LA6NFU8 196 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 INMT-MINDY4F8WBC2 141 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 H0Y980 276 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 H0YJW9 148 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TSPAN4O14817 238 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ARPC1BO15143 372 aaKnown RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PRAF2O60831 178 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 SFT2D2O95562 160 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 DUS4LO95620 317 aaKnown RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TGFAP01135 160 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TSHBP01222 138 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 IGHV1-69P01742 117 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 IGHV3-7P01780 117 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 OR4E1P0C645 316 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ANXA7P20073 488 aaKnown RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 NFYBP25208 207 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 SAA4P35542 130 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 SRP14P37108 136 aaKnown RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 INPP1P49441 399 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PIGPP57054 158 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PRB3Q04118 309 aaPredicted RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 BAMBIQ13145 260 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 KLRD1Q13241 179 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PPP1R1AQ13522 171 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TMEM187Q14656 261 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ANKRD55Q3KP44 614 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 SCGB2B2Q4G0G5 96 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 RPL39P5Q59GN2 51 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TPTE2P1Q5T6R2 138 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PLET1Q6UQ28 207 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 LHFPL4Q7Z7J7 247 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 PNKDQ8N490 385 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 Q8N6K4 173 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TCTEX1D1Q8N7M0 179 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 LHFPL5Q8TAF8 219 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ENKURQ8TC29 256 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ZNF418Q8TF45 676 aaPredicted RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 MALSU1Q96EH3 234 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 HARBI1Q96MB7 349 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TP53RKQ96S44 253 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 HSD17B10Q99714 261 aaKnown RBP4.26□□□□□ -1.73
C9orf3-205ENST00000427193 SLC5A7Q9GZV3 580 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 TMEM222Q9H0R3 208 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 OR2D2Q9H210 308 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 NAA60Q9H7X0 242 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 ONECUT1Q9UBC0 465 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 RNF150Q9ULK6 438 aa4.26□□□□□ -1.73
C9orf3-205ENST00000427193 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TRAV6A0A075B6T7 132 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 IGHV1-3A0A0C4DH29 117 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 C3orf85A0A1B0GTC6 90 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 A0A1B0GVG6 124 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 SRRM4A7MD48 611 aaKnown RBP4.25□□□□□ -1.73
C9orf3-205ENST00000427193 LEUTXA8MZ59 168 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 HSD17B6O14756 317 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 NPFFO15130 113 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TXNL1O43396 289 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 RAMP3O60896 148 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 IGLV2-23P01705 113 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 IGKV1-16P04430 117 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 CRYGBP07316 175 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 COX7A1P24310 79 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 HTR1DP28221 377 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 PRRX1P54821 245 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TAS2R31P59538 309 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 FXYD4P59646 89 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 HERV-K104P61576 105 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 RPP30P78346 268 aaKnown RBP4.25□□□□□ -1.73
C9orf3-205ENST00000427193 LTC4SQ16873 150 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TATDN3Q17R31 274 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TRIM16LQ309B1 348 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 LYG2Q86SG7 212 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 CMTM1Q8IZ96 169 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 OR8H3Q8N146 312 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 DRAXINQ8NBI3 349 aaPredicted RBP4.25□□□□□ -1.73
C9orf3-205ENST00000427193 ZNF431Q8TF32 576 aaPredicted RBP4.25□□□□□ -1.73
C9orf3-205ENST00000427193 IL22RA2Q969J5 263 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 TOMM40LQ969M1 308 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 SEC22AQ96IW7 307 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 ADTRPQ96IZ2 230 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 MRPL20Q9BYC9 149 aaKnown RBP4.25□□□□□ -1.73
C9orf3-205ENST00000427193 PLSCR3Q9NRY6 295 aa4.25□□□□□ -1.73
C9orf3-205ENST00000427193 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 TRAV40A0A0B4J280 105 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 A0A0G2JRQ6 117 aa4.24□□□□□ -1.73
C9orf3-205ENST00000427193 TEX13DA0A0J9YY54 714 aaPredicted RBP4.24□□□□□ -1.73
C9orf3-205ENST00000427193 G3V3Q6 166 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms